RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 GNPTABQ3T906 1256 aa17.77■□□□□ 0.44
CTTN-215ENST00000533931 RASGRP4Q8TDF6 673 aa17.77■□□□□ 0.44
CTTN-215ENST00000533931 CDHR1Q96JP9 859 aa17.77■□□□□ 0.44
CTTN-215ENST00000533931 HTTP42858 3142 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 STX6O43752 255 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 INHAP05111 366 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 TGFB3P10600 412 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 GCFC2P16383 781 aaKnown RBP17.76■□□□□ 0.43
CTTN-215ENST00000533931 CAPN2P17655 700 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 ICAM3P32942 547 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 FOSBP53539 338 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 MRPS9P82933 396 aaKnown RBP17.76■□□□□ 0.43
CTTN-215ENST00000533931 CACNB2Q08289 660 aaPredicted RBP17.76■□□□□ 0.43
CTTN-215ENST00000533931 ACVR2BQ13705 512 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 GNL2Q13823 731 aaKnown RBP17.76■□□□□ 0.43
CTTN-215ENST00000533931 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 NEK8Q86SG6 692 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 IL31RAQ8NI17 732 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 TBCKQ8TEA7 893 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 GPRASP2Q96D09 838 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 DAXXQ9UER7 740 aaPredicted RBP17.76■□□□□ 0.43
CTTN-215ENST00000533931 UBIAD1Q9Y5Z9 338 aa17.76■□□□□ 0.43
CTTN-215ENST00000533931 CYP3A7-CYP3A51PA0A087WV96 503 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 MSCO60682 206 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 ZNF865P0CJ78 1059 aaPredicted RBP17.75■□□□□ 0.43
CTTN-215ENST00000533931 PRKAR2AP13861 404 aaKnown RBP17.75■□□□□ 0.43
CTTN-215ENST00000533931 CYP3A7P24462 503 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 SETQ01105 290 aaPredicted RBP17.75■□□□□ 0.43
CTTN-215ENST00000533931 CEP55Q53EZ4 464 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 IQSEC1Q6DN90 963 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 PPP4R3AQ6IN85 833 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 PIK3AP1Q6ZUJ8 805 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 NLRX1Q86UT6 975 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 MBOAT7Q96N66 472 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
CTTN-215ENST00000533931 VPS37CA5D8V6 355 aaPredicted RBP17.74■□□□□ 0.43
CTTN-215ENST00000533931 SEPT4O43236 478 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 FIBPO43427 364 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
CTTN-215ENST00000533931 AKR1A1P14550 325 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 TAPT1Q6NXT6 567 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 ZNF333Q96JL9 665 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 PGBD1Q96JS3 809 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 MXRA8Q9BRK3 442 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 MCOLN1Q9GZU1 580 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 ZSCAN16Q9H4T2 348 aaPredicted RBP17.74■□□□□ 0.43
CTTN-215ENST00000533931 HMX1Q9NP08 348 aaPredicted RBP17.74■□□□□ 0.43
CTTN-215ENST00000533931 JADE2Q9NQC1 790 aa17.74■□□□□ 0.43
CTTN-215ENST00000533931 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
CTTN-215ENST00000533931 SPATA31C2B4DYI2 1134 aa17.73■□□□□ 0.43
CTTN-215ENST00000533931 MEIS1O00470 390 aa17.73■□□□□ 0.43
CTTN-215ENST00000533931 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
CTTN-215ENST00000533931 INF2Q27J81 1249 aa17.73■□□□□ 0.43
CTTN-215ENST00000533931 SH3TC2Q8TF17 1288 aa17.73■□□□□ 0.43
CTTN-215ENST00000533931 ZHX1Q9UKY1 873 aaPredicted RBP17.73■□□□□ 0.43
CTTN-215ENST00000533931 FAM184BQ9ULE4 1060 aa17.73■□□□□ 0.43
CTTN-215ENST00000533931 Q9Y3F1 56 aa17.73■□□□□ 0.43
CTTN-215ENST00000533931 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 RGS20O76081 388 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 ITGB5P18084 799 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 ZNF76P36508 570 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 TTLL4Q14679 1199 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 Q4G0T1 1027 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 RILPL1Q5EBL4 403 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 EARS2Q5JPH6 523 aaKnown RBP17.72■□□□□ 0.43
CTTN-215ENST00000533931 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 CCDC62Q6P9F0 684 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 FBXO16Q8IX29 292 aaPredicted RBP17.72■□□□□ 0.43
CTTN-215ENST00000533931 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
CTTN-215ENST00000533931 TRPV1Q8NER1 839 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 SENP7Q9BQF6 1050 aa17.72■□□□□ 0.43
CTTN-215ENST00000533931 PAK6Q9NQU5 681 aaPredicted RBP17.72■□□□□ 0.43
CTTN-215ENST00000533931 EDIL3O43854 480 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 DDIT3P35638 169 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 NKX3-2P78367 333 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 TRIM32Q13049 653 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 MTMR1Q13613 665 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 CCDC144BQ3MJ40 725 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 DUSP28Q4G0W2 176 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
CTTN-215ENST00000533931 MRVI1Q9Y6F6 885 aa17.71■□□□□ 0.43
CTTN-215ENST00000533931 FAM86B1E9PN63 330 aa17.7■□□□□ 0.42
CTTN-215ENST00000533931 TBX3O15119 743 aa17.7■□□□□ 0.42
CTTN-215ENST00000533931 DUSP11O75319 330 aaKnown RBP17.7■□□□□ 0.42
CTTN-215ENST00000533931 FAM86B2P0C5J1 330 aa17.7■□□□□ 0.42
CTTN-215ENST00000533931 ZSCAN22P10073 491 aaPredicted RBP17.7■□□□□ 0.42
CTTN-215ENST00000533931 RESTQ13127 1097 aa17.7■□□□□ 0.42
CTTN-215ENST00000533931 SPRYD3Q8NCJ5 442 aa17.7■□□□□ 0.42
CTTN-215ENST00000533931 EMID1Q96A84 441 aaPredicted RBP17.7■□□□□ 0.42
CTTN-215ENST00000533931 LENG9Q96B70 501 aa17.7■□□□□ 0.42
CTTN-215ENST00000533931 WDR11Q9BZH6 1224 aa17.7■□□□□ 0.42
CTTN-215ENST00000533931 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.429e-6■■■■■ 32.4
CTTN-215ENST00000533931 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
CTTN-215ENST00000533931 DDX41Q9UJV9 622 aaKnown RBP17.7■□□□□ 0.42
CTTN-215ENST00000533931 FAM205CA6NFA0 338 aa17.69■□□□□ 0.42
CTTN-215ENST00000533931 CCL5P13501 91 aa17.69■□□□□ 0.42
CTTN-215ENST00000533931 NUCB2P80303 420 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms