RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 OTOP2Q7RTS6 562 aa20.22■□□□□ 0.83
VPS51-213ENST00000533827 EMID1Q96A84 441 aaPredicted RBP20.22■□□□□ 0.83
VPS51-213ENST00000533827 MTIF3Q9H2K0 278 aaKnown RBP20.22■□□□□ 0.83
VPS51-213ENST00000533827 ZNF576Q9H609 170 aa20.22■□□□□ 0.83
VPS51-213ENST00000533827 PNMA6FA0A0J9YX94 578 aa20.21■□□□□ 0.83
VPS51-213ENST00000533827 RGS20O76081 388 aa20.21■□□□□ 0.83
VPS51-213ENST00000533827 HOXA13P31271 388 aaPredicted RBP20.21■□□□□ 0.83
VPS51-213ENST00000533827 CATIPQ7Z7H3 387 aa20.21■□□□□ 0.83
VPS51-213ENST00000533827 VSIG10LQ86VR7 867 aa20.21■□□□□ 0.83
VPS51-213ENST00000533827 MAFAQ8NHW3 353 aaPredicted RBP20.21■□□□□ 0.83
VPS51-213ENST00000533827 KAT2BQ92831 832 aa20.21■□□□□ 0.83
VPS51-213ENST00000533827 LSG1Q9H089 658 aaKnown RBP20.21■□□□□ 0.83
VPS51-213ENST00000533827 PFKMP08237 780 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 FOSL2P15408 326 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 CASTP20810 708 aaKnown RBP20.2■□□□□ 0.82
VPS51-213ENST00000533827 PGM5Q15124 567 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.2■□□□□ 0.82
VPS51-213ENST00000533827 MAP3K14Q99558 947 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 ESYT1Q9BSJ8 1104 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 MTA3Q9BTC8 594 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 LY9Q9HBG7 655 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 MRVI1Q9Y6F6 885 aa20.2■□□□□ 0.82
VPS51-213ENST00000533827 GCOM1H8Y6P7 765 aaPredicted RBP20.19■□□□□ 0.82
VPS51-213ENST00000533827 PITPNM1O00562 1244 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 POLR2MP0CAP2 368 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 MYCLP12524 364 aaPredicted RBP20.19■□□□□ 0.82
VPS51-213ENST00000533827 LAMC2Q13753 1193 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 RAB30Q15771 203 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 DGKDQ16760 1214 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 SESTD1Q86VW0 696 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 ZNF654Q8IZM8 581 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 IL31RAQ8NI17 732 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 CHD9Q3L8U1 2897 aa20.19■□□□□ 0.82
VPS51-213ENST00000533827 GBF1Q92538 1859 aa20.18■□□□□ 0.82
VPS51-213ENST00000533827 TANC1Q9C0D5 1861 aa20.18■□□□□ 0.82
VPS51-213ENST00000533827 DDAH1O94760 285 aa20.18■□□□□ 0.82
VPS51-213ENST00000533827 KCNV1Q6PIU1 500 aa20.18■□□□□ 0.82
VPS51-213ENST00000533827 DHX37Q8IY37 1157 aaKnown RBP20.18■□□□□ 0.82
VPS51-213ENST00000533827 PPTC7Q8NI37 304 aa20.18■□□□□ 0.82
VPS51-213ENST00000533827 CTAGE1Q96RT6 745 aa20.18■□□□□ 0.82
VPS51-213ENST00000533827 SCN5AQ14524 2016 aa20.18■□□□□ 0.82
VPS51-213ENST00000533827 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
VPS51-213ENST00000533827 PRUNE2Q8WUY3 3088 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 SLC27A2O14975 620 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 PRC1O43663 620 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 IQCF3P0C7M6 154 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 SMARCA1P28370 1054 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 RFC2P35250 354 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 CHMP4BP1P59074 171 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 COL9A3Q14050 684 aaPredicted RBP20.17■□□□□ 0.82
VPS51-213ENST00000533827 NECTIN1Q15223 517 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 PTGISQ16647 500 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 MYSM1Q5VVJ2 828 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 GDF6Q6KF10 455 aaPredicted RBP20.17■□□□□ 0.82
VPS51-213ENST00000533827 CASC1Q6TDU7 716 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 MYL10Q9BUA6 226 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 SPZ1Q9BXG8 430 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 MSRAQ9UJ68 235 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 NOD1Q9Y239 953 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 SLC4A7Q9Y6M7 1214 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 MYH7BA7E2Y1 1941 aa20.17■□□□□ 0.82
VPS51-213ENST00000533827 SH2B2O14492 632 aaPredicted RBP20.16■□□□□ 0.82
VPS51-213ENST00000533827 HOXD8P13378 290 aaPredicted RBP20.16■□□□□ 0.82
VPS51-213ENST00000533827 CCND2P30279 289 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 MCM5P33992 734 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 SP2Q02086 613 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 BFSP2Q13515 415 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 DEFB128Q7Z7B8 93 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 FCHSD1Q86WN1 690 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 TMTC2Q8N394 836 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 RETREG2Q8NC44 543 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 CTCFLQ8NI51 663 aaPredicted RBP20.16■□□□□ 0.82
VPS51-213ENST00000533827 TMEM87BQ96K49 555 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 YBX2Q9Y2T7 364 aaKnown RBP20.16■□□□□ 0.82
VPS51-213ENST00000533827 FRMPD4Q14CM0 1322 aa20.16■□□□□ 0.82
VPS51-213ENST00000533827 HAS3O00219 553 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 PPFIA4O75335 1185 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 F2P00734 622 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 TGFB3P10600 412 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 KIF5BP33176 963 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 PSEN2P49810 448 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 HSDL1Q3SXM5 330 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 CELF3Q5SZQ8 465 aaKnown RBP20.15■□□□□ 0.82
VPS51-213ENST00000533827 CREB3L3Q68CJ9 461 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 PIBF1Q8WXW3 757 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 ZFP91Q96JP5 570 aaPredicted RBP20.15■□□□□ 0.82
VPS51-213ENST00000533827 KATNAL1Q9BW62 490 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 HDAC6Q9UBN7 1215 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 GTF2IRD1Q9UHL9 959 aa20.15■□□□□ 0.82
VPS51-213ENST00000533827 ZBBXA8MT70 800 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 GGPS1O95749 300 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 UBA1P22314 1058 aaKnown RBP20.14■□□□□ 0.81
VPS51-213ENST00000533827 LIFRP42702 1097 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 MRPS9P82933 396 aaKnown RBP20.14■□□□□ 0.81
VPS51-213ENST00000533827 BMP2KLQ5H9B9 411 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 SKAP1Q86WV1 359 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 CAGE1Q8TC20 777 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 AFAP1L1Q8TED9 768 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 DHX38Q92620 1227 aaKnown RBP20.14■□□□□ 0.81
VPS51-213ENST00000533827 GPKOWQ92917 476 aaPredicted RBP eCLIP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms