RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 PHF20Q9BVI0 1012 aa4.13□□□□□ -1.75
ATM-220ENST00000533526 LNPKQ9C0E8 428 aa4.13□□□□□ -1.75
ATM-220ENST00000533526 RNF38Q9H0F5 515 aa4.13□□□□□ -1.75
ATM-220ENST00000533526 ZSWIM4Q9H7M6 989 aa4.13□□□□□ -1.75
ATM-220ENST00000533526 CNTD2Q9H8S5 307 aa4.13□□□□□ -1.75
ATM-220ENST00000533526 GCM1Q9NP62 436 aa4.13□□□□□ -1.75
ATM-220ENST00000533526 IRAK3Q9Y616 596 aa4.13□□□□□ -1.75
ATM-220ENST00000533526 DGKIO75912 1065 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 LCP1P13796 627 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 GPR85P60893 370 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 GABREP78334 506 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 ZNF124Q15973 351 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 CCDC144BQ3MJ40 725 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 FAM209AQ5JX71 171 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 YOD1Q5VVQ6 348 aaPredicted RBP4.12□□□□□ -1.75
ATM-220ENST00000533526 LBX2Q6XYB7 198 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 NLGN1Q8N2Q7 840 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.12□□□□□ -1.75
ATM-220ENST00000533526 ZSCAN18Q8TBC5 510 aaPredicted RBP4.12□□□□□ -1.75
ATM-220ENST00000533526 ALG3Q92685 438 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 SGPP1Q9BX95 441 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 PCDH18Q9HCL0 1135 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 CD320Q9NPF0 282 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 CLDND1Q9NY35 253 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 FBLN5Q9UBX5 448 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 CNOT6Q9ULM6 557 aaKnown RBP4.12□□□□□ -1.75
ATM-220ENST00000533526 NUB1Q9Y5A7 615 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 PCDHA5Q9Y5H7 936 aa4.12□□□□□ -1.75
ATM-220ENST00000533526 NPIPB6E9PJ23 425 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 RFXAPO00287 272 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 KRIT1O00522 736 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 HGSO14964 777 aaPredicted RBP4.11□□□□□ -1.75
ATM-220ENST00000533526 BUB1BO60566 1050 aaPredicted RBP4.11□□□□□ -1.75
ATM-220ENST00000533526 EFCAB14O75071 495 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 FPR2P25090 351 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 CDR1P51861 262 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 ZNF200P98182 395 aaPredicted RBP4.11□□□□□ -1.75
ATM-220ENST00000533526 BMS1Q14692 1282 aaKnown RBP4.11□□□□□ -1.75
ATM-220ENST00000533526 NTRK3Q16288 839 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 C2orf27AQ580R0 203 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 TMEM151BQ8IW70 566 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 CPA5Q8WXQ8 436 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 KISS1RQ969F8 398 aaPredicted RBP4.11□□□□□ -1.75
ATM-220ENST00000533526 ALG1Q9BT22 464 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 EPB41L1Q9H4G0 881 aa4.11□□□□□ -1.75
ATM-220ENST00000533526 NGRNQ9NPE2 291 aaKnown RBP4.11□□□□□ -1.75
ATM-220ENST00000533526 MRPS23Q9Y3D9 190 aaKnown RBP4.11□□□□□ -1.75
ATM-220ENST00000533526 FAM47E-STBD1D6RA91 191 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 IRS4O14654 1257 aaPredicted RBP4.1□□□□□ -1.75
ATM-220ENST00000533526 GSTA4O15217 222 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 SGSM2O43147 1006 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 MSCO60682 206 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 TADA3O75528 432 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 RANGAP1P46060 587 aaPredicted RBP4.1□□□□□ -1.75
ATM-220ENST00000533526 EMC4Q5J8M3 183 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 FOXB2Q5VYV0 432 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 STEAP3Q658P3 488 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 CIAPIN1Q6FI81 312 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 CYP4F22Q6NT55 531 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 KCNT2Q6UVM3 1135 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 MILR1Q7Z6M3 343 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 NLRP10Q86W26 655 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 AMIGO3Q86WK7 504 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 IGDCC3Q8IVU1 814 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 TRIM48Q8IWZ4 208 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 LILRB2Q8N423 598 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 PHOSPHO1Q8TCT1 267 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 EXOC2Q96KP1 924 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 SMOC1Q9H4F8 434 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 ZNF652Q9Y2D9 606 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 FAN1Q9Y2M0 1017 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 KCTD3Q9Y597 815 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 HCFC2Q9Y5Z7 792 aa4.1□□□□□ -1.75
ATM-220ENST00000533526 BLACEA4D250 179 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 SOD2P04179 222 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 ASGR2P07307 311 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 FBLN1P23142 703 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 GRK2P25098 689 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 GRK3P35626 688 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 EPHB3P54753 998 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 LINC00310P59036 64 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 CAP1Q01518 475 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 SPIRE1Q08AE8 756 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 PAK1Q13153 545 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 SIAH1Q8IUQ4 282 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 PANK1Q8TE04 598 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATM-220ENST00000533526 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 MRPL4Q9BYD3 311 aaKnown RBP4.09□□□□□ -1.75
ATM-220ENST00000533526 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 CDIP1Q9H305 208 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 RXFP1Q9HBX9 757 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 SLC6A20Q9NP91 592 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 PALD1Q9ULE6 856 aa4.09□□□□□ -1.75
ATM-220ENST00000533526 WNT9AO14904 365 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 NUAK1O60285 661 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 C6orf222P0C671 652 aaPredicted RBP4.08□□□□□ -1.76
ATM-220ENST00000533526 GNAT1P11488 350 aa4.08□□□□□ -1.76
ATM-220ENST00000533526 IGFBP6P24592 240 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms