RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 SART3Q15020 963 aaKnown RBP13.13□□□□□ -0.31
CLCF1-202ENST00000533438 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 ARHGEF16Q5VV41 709 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 SEPT14Q6ZU15 432 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 PIGSQ96S52 555 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
CLCF1-202ENST00000533438 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
CLCF1-202ENST00000533438 PCDHA1Q9Y5I3 950 aa13.13□□□□□ -0.31
CLCF1-202ENST00000533438 TRIP12Q14669 1992 aaPredicted RBP13.12□□□□□ -0.31
CLCF1-202ENST00000533438 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
CLCF1-202ENST00000533438 FGBP02675 491 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 CYP2C9P11712 490 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 PTPN11Q06124 597 aaPredicted RBP13.12□□□□□ -0.31
CLCF1-202ENST00000533438 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 AFG1LQ8WV93 481 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
CLCF1-202ENST00000533438 SCLYQ96I15 445 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 MTA3Q9BTC8 594 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 PBX4Q9BYU1 374 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 ZNF576Q9H609 170 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 LY9Q9HBG7 655 aa13.12□□□□□ -0.31
CLCF1-202ENST00000533438 CXXC1Q9P0U4 656 aaPredicted RBP13.12□□□□□ -0.31
CLCF1-202ENST00000533438 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 GRXCR1A8MXD5 290 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 TNFRSF10AO00220 468 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 RGS20O76081 388 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 HOXA13P31271 388 aaPredicted RBP13.11□□□□□ -0.31
CLCF1-202ENST00000533438 TRAF1Q13077 416 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
CLCF1-202ENST00000533438 PGM5Q15124 567 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 ATXN2LQ8WWM7 1075 aaKnown RBP13.11□□□□□ -0.31
CLCF1-202ENST00000533438 KAT2BQ92831 832 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 TIFAQ96CG3 184 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
CLCF1-202ENST00000533438 CHD7Q9P2D1 2997 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 PBX2P40425 430 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 FAM47CQ5HY64 1035 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 OTOP2Q7RTS6 562 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 VSIG10LQ86VR7 867 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 SESTD1Q86VW0 696 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
CLCF1-202ENST00000533438 ZNF654Q8IZM8 581 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 IL31RAQ8NI17 732 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 MTIF3Q9H2K0 278 aaKnown RBP13.1□□□□□ -0.31
CLCF1-202ENST00000533438 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 XIRP2A4UGR9 3374 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 DOCK5Q9H7D0 1870 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 FRMPD4Q14CM0 1322 aa13.1□□□□□ -0.31
CLCF1-202ENST00000533438 GCOM1H8Y6P7 765 aaPredicted RBP13.09□□□□□ -0.31
CLCF1-202ENST00000533438 SLC27A2O14975 620 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 PRC1O43663 620 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 DDAH1O94760 285 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 PFKMP08237 780 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 POLR2MP0CAP2 368 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 MYCLP12524 364 aaPredicted RBP13.09□□□□□ -0.31
CLCF1-202ENST00000533438 CASTP20810 708 aaKnown RBP13.09□□□□□ -0.31
CLCF1-202ENST00000533438 SMARCA1P28370 1054 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 NECTIN1Q15223 517 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 DGKDQ16760 1214 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 BMP2KLQ5H9B9 411 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 USP38Q8NB14 1042 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 PPTC7Q8NI37 304 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 TMEM87BQ96K49 555 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 CTAGE1Q96RT6 745 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 SPZ1Q9BXG8 430 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
CLCF1-202ENST00000533438 TRANK1O15050 2925 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 HAS3O00219 553 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
CLCF1-202ENST00000533438 IQCF3P0C7M6 154 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
CLCF1-202ENST00000533438 MCM5P33992 734 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.32
CLCF1-202ENST00000533438 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 DHX37Q8IY37 1157 aaKnown RBP13.08□□□□□ -0.32
CLCF1-202ENST00000533438 CTCFLQ8NI51 663 aaPredicted RBP13.08□□□□□ -0.32
CLCF1-202ENST00000533438 GTF2IRD1Q9UHL9 959 aa13.08□□□□□ -0.32
CLCF1-202ENST00000533438 F2P00734 622 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 TGFB3P10600 412 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 CCND2P30279 289 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 KIF5BP33176 963 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 RFC2P35250 354 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 LIFRP42702 1097 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 SP2Q02086 613 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 BFSP2Q13515 415 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms