RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.97
COMMD9-207ENST00000533308 TBCKQ8TEA7 893 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 CRYGNQ8WXF5 182 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
COMMD9-207ENST00000533308 RTEL1Q9NZ71 1219 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 ADD3Q9UEY8 706 aaKnown RBP9.02□□□□□ -0.97
COMMD9-207ENST00000533308 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 BRCA2P51587 3418 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 FAM86B1E9PN63 330 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 H3BQV1 296 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 FAM86B2P0C5J1 330 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 ITGB5P18084 799 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 CCND2P30279 289 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 ADCYAP1R1P41586 468 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 IFFO2Q5TF58 517 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 MFSD14CQ5VZR4 134 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 PCNX4Q63HM2 1172 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 MCTP1Q6DN14 999 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 GALNT17Q6IS24 598 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 TAPT1Q6NXT6 567 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 SEPT14Q6ZU15 432 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 KRT25Q7Z3Z0 450 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 VSIG10LQ86VR7 867 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 SAMD3Q8N6K7 520 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 BICD2Q8TD16 824 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 COPS5Q92905 334 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 WDR11Q9BZH6 1224 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 UNC93B1Q9H1C4 597 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 BCAS3Q9H6U6 928 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 SLC5A4Q9NY91 659 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 PKD2L1Q9P0L9 805 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 TELO2Q9Y4R8 837 aa9.01□□□□□ -0.97
COMMD9-207ENST00000533308 IGLV3-22A0A075B6J6 115 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 CCDC194A0A1B0GVG4 234 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 POTEFA5A3E0 1075 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 ASB14A6NK59 587 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 STX6O43752 255 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 SLC37A4O43826 429 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 SMPD1P17405 629 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 RESTQ13127 1097 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 ACVR2BQ13705 512 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 NONOQ15233 471 aaKnown RBP eCLIP9□□□□□ -0.97
COMMD9-207ENST00000533308 CCDC144BQ3MJ40 725 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 FAM173BQ6P4H8 233 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 FAM177A1Q8N128 213 aaPredicted RBP9□□□□□ -0.97
COMMD9-207ENST00000533308 GJA10Q969M2 543 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 LENG9Q96B70 501 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 ARMC5Q96C12 935 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 ZNF333Q96JL9 665 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 CHAMP1Q96JM3 812 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 FTOQ9C0B1 505 aaKnown RBP eCLIP9□□□□□ -0.97
COMMD9-207ENST00000533308 GLT8D2Q9H1C3 349 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 FOXP1Q9H334 677 aaPredicted RBP9□□□□□ -0.97
COMMD9-207ENST00000533308 BRMS1Q9HCU9 246 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 KIF3AQ9Y496 699 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 UBIAD1Q9Y5Z9 338 aa9□□□□□ -0.97
COMMD9-207ENST00000533308 WDR81Q562E7 1941 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 MYADML2A6NDP7 307 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 FOSP01100 380 aaPredicted RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 ARP10275 920 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 CCL5P13501 91 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 ATP2B1P20020 1258 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 UBA1P22314 1058 aaKnown RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 U2AF2P26368 475 aaKnown RBP eCLIP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 CNGA1P29973 690 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 DDIT3P35638 169 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 TOB1P50616 345 aaPredicted RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 SP2Q02086 613 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 SAFBQ15424 915 aaKnown RBP eCLIP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 STXBP2Q15833 593 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 PKN2Q16513 984 aaKnown RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 LY6KQ17RY6 165 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 LETM2Q2VYF4 491 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 FOXD4L6Q3SYB3 417 aaPredicted RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 FOXD4L3Q6VB84 417 aaPredicted RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 NEK8Q86SG6 692 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 POTEDQ86YR6 584 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 NOSTRINQ8IVI9 506 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 MSL3Q8N5Y2 521 aaKnown RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 INPP4AQ96PE3 977 aaPredicted RBP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 IWS1Q96ST2 819 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 MAF1Q9H063 256 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.99□□□□□ -0.97
COMMD9-207ENST00000533308 ABHD16BQ9H3Z7 469 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 VTA1Q9NP79 307 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 CNPY2Q9Y2B0 182 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 ZDHHC9Q9Y397 364 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 MRVI1Q9Y6F6 885 aa8.99□□□□□ -0.97
COMMD9-207ENST00000533308 LOC102724159A0A0B4J2E5 919 aa8.98□□□□□ -0.97
COMMD9-207ENST00000533308 CCNT1O60563 726 aaKnown RBP8.98□□□□□ -0.97
COMMD9-207ENST00000533308 ATP9AO75110 1047 aa8.98□□□□□ -0.97
COMMD9-207ENST00000533308 EIF3JO75822 258 aaKnown RBP8.98□□□□□ -0.97
COMMD9-207ENST00000533308 CYP3A4P08684 503 aa8.98□□□□□ -0.97
COMMD9-207ENST00000533308 KCNA2P16389 499 aa8.98□□□□□ -0.97
COMMD9-207ENST00000533308 CIITAP33076 1130 aa8.98□□□□□ -0.97
COMMD9-207ENST00000533308 ITGB3BPQ13352 177 aaPredicted RBP8.98□□□□□ -0.97
COMMD9-207ENST00000533308 GNL2Q13823 731 aaKnown RBP8.98□□□□□ -0.97
COMMD9-207ENST00000533308 PWP2Q15269 919 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms