RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 MECOMQ03112 1051 aa10.35□□□□□ -0.75
BDNF-216ENST00000532997 PDXDC1Q6P996 788 aa10.35□□□□□ -0.75
BDNF-216ENST00000532997 KRT26Q7Z3Y9 468 aa10.35□□□□□ -0.75
BDNF-216ENST00000532997 PEX26Q7Z412 305 aa10.35□□□□□ -0.75
BDNF-216ENST00000532997 AENQ8WTP8 325 aaKnown RBP10.35□□□□□ -0.75
BDNF-216ENST00000532997 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
BDNF-216ENST00000532997 RAB17Q9H0T7 212 aa10.35□□□□□ -0.75
BDNF-216ENST00000532997 PPANQ9NQ55 473 aaKnown RBP10.35□□□□□ -0.75
BDNF-216ENST00000532997 CAMTA1Q9Y6Y1 1673 aa10.35□□□□□ -0.75
BDNF-216ENST00000532997 ADAMTS7Q9UKP4 1686 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 PP2D1A8MPX8 630 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 RNASE9P60153 205 aaKnown RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 TXNRD1Q16881 649 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 HERC4Q5GLZ8 1057 aaPredicted RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 ZNF507Q8TCN5 953 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 CAVIN3Q969G5 261 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 KIF13AQ9H1H9 1805 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 C4AP0C0L4 1744 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 C4BP0C0L5 1744 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 TFRCP02786 760 aaKnown RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 BIRC3Q13489 604 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 HAUS3Q68CZ6 603 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 CEP63Q96MT8 703 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 MTRF1LQ9UGC7 380 aaKnown RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 CCDC188H7C350 402 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 MEFVO15553 781 aaPredicted RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 CALUO43852 315 aaPredicted RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 DRP2Q13474 957 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 DDB1Q16531 1140 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 TBCKQ8TEA7 893 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 ATP6V1G3Q96LB4 118 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 EYA3Q99504 573 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 RIOK1Q9BRS2 568 aaKnown RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 PANK4Q9NVE7 773 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 SAMD15Q9P1V8 674 aa10.34□□□□□ -0.75
BDNF-216ENST00000532997 BIN2Q9UBW5 565 aaPredicted RBP10.34□□□□□ -0.75
BDNF-216ENST00000532997 PGRMC1O00264 195 aaKnown RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 NMT2O60551 498 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 EPB41P11171 864 aaKnown RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 MAP2K1Q02750 393 aaPredicted RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 GKAP1Q5VSY0 366 aaPredicted RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 SUGP1Q8IWZ8 645 aaKnown RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 NCAPGQ9BPX3 1015 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 TACO1Q9BSH4 297 aaKnown RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 EPN3Q9H201 632 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 FAM114A2Q9NRY5 505 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 TFCP2L1Q9NZI6 479 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 REXO2Q9Y3B8 237 aaKnown RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 PARP4Q9UKK3 1724 aaKnown RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 PPP1R37O75864 691 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 CETN1Q12798 172 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 STK4Q13043 487 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 FOXR1Q6PIV2 292 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 TPTE2Q6XPS3 522 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 TAX1BP1Q86VP1 789 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 CEP57Q86XR8 500 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 SMCR8Q8TEV9 937 aaPredicted RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 RGPD5Q99666 1765 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 MYH8P13535 1937 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 KRIT1O00522 736 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 IFT88Q13099 833 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 IKQ13123 557 aaPredicted RBP10.33□□□□□ -0.76
BDNF-216ENST00000532997 TNFRSF25Q93038 417 aa10.33□□□□□ -0.76
BDNF-216ENST00000532997 CHUKO15111 745 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 PALMO75781 387 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 FTCDO95954 541 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 H2AFZP0C0S5 128 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 SKOR1P84550 965 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 FUT2Q10981 343 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 KDM7AQ6ZMT4 941 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 H2AFVQ71UI9 128 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 SYN2Q92777 582 aaPredicted RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 CCDC113Q9H0I3 377 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 CNOT10Q9H9A5 744 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 AMFRQ9UKV5 643 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 TFR2Q9UP52 801 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 MYH6P13533 1939 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 TNS2Q63HR2 1409 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 ATP2C2O75185 946 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 PRPF6O94906 941 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 FCER1AP12319 257 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
BDNF-216ENST00000532997 TNFRSF8P28908 595 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 SLC8A1P32418 973 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 ZNF76P36508 570 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 WDR59Q6PJI9 974 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 LRIG3Q6UXM1 1119 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 GPIHBP1Q8IV16 184 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 P3H4Q92791 437 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 ZIM3Q96PE6 472 aa10.32□□□□□ -0.76
BDNF-216ENST00000532997 SELENOSQ9BQE4 189 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms