RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 KCNJ14Q9UNX9 436 aa28.43■■■□□ 2.14
USP48-214ENST00000532737 LRRC37A2A6NM11 1700 aa28.43■■■□□ 2.14
USP48-214ENST00000532737 FOSP01100 380 aaPredicted RBP28.42■■■□□ 2.14
USP48-214ENST00000532737 RARBP10826 455 aa28.42■■■□□ 2.14
USP48-214ENST00000532737 CCND2P30279 289 aa28.42■■■□□ 2.14
USP48-214ENST00000532737 MRPS9P82933 396 aaKnown RBP28.42■■■□□ 2.14
USP48-214ENST00000532737 TNFAIP2Q03169 654 aa28.42■■■□□ 2.14
USP48-214ENST00000532737 FAM177A1Q8N128 213 aaPredicted RBP28.42■■■□□ 2.14
USP48-214ENST00000532737 RASGRP4Q8TDF6 673 aa28.42■■■□□ 2.14
USP48-214ENST00000532737 ANO3Q9BYT9 981 aa28.42■■■□□ 2.14
USP48-214ENST00000532737 RGS20O76081 388 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 SMPD1P17405 629 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 PTGS1P23219 599 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 AP3B2Q13367 1082 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 NPY5RQ15761 445 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 SEPT14Q6ZU15 432 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 REXO1Q8N1G1 1221 aaKnown RBP28.41■■■□□ 2.14
USP48-214ENST00000532737 WDR11Q9BZH6 1224 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 PCDHA4Q9UN74 947 aa28.41■■■□□ 2.14
USP48-214ENST00000532737 DUSP11O75319 330 aaKnown RBP28.4■■■□□ 2.14
USP48-214ENST00000532737 PCNX4Q63HM2 1172 aa28.4■■■□□ 2.14
USP48-214ENST00000532737 BICD2Q8TD16 824 aa28.4■■■□□ 2.14
USP48-214ENST00000532737 SCFD2Q8WU76 684 aa28.4■■■□□ 2.14
USP48-214ENST00000532737 PHF20Q9BVI0 1012 aa28.4■■■□□ 2.14
USP48-214ENST00000532737 XPNPEP3Q9NQH7 507 aa28.4■■■□□ 2.14
USP48-214ENST00000532737 TRIOBPQ9H2D6 2365 aa28.4■■■□□ 2.14
USP48-214ENST00000532737 GJC2Q5T442 439 aaPredicted RBP28.39■■■□□ 2.14
USP48-214ENST00000532737 XRRA1Q6P2D8 792 aa28.39■■■□□ 2.14
USP48-214ENST00000532737 CCDC62Q6P9F0 684 aa28.39■■■□□ 2.14
USP48-214ENST00000532737 GNEQ9Y223 722 aaKnown RBP28.39■■■□□ 2.14
USP48-214ENST00000532737 ARIH2O95376 493 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 PGK1P00558 417 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 CAPN2P17655 700 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 XBP1P17861 261 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 MNX1P50219 401 aaPredicted RBP28.38■■■□□ 2.13
USP48-214ENST00000532737 MCTP2Q6DN12 878 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 GALNT17Q6IS24 598 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 BLIDQ8IZY5 108 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 DAGLBQ8NCG7 672 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 EHMT1Q9H9B1 1298 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 RTEL1Q9NZ71 1219 aa28.38■■■□□ 2.13
USP48-214ENST00000532737 SREBF1P36956 1147 aa28.37■■■□□ 2.13
USP48-214ENST00000532737 FOSBP53539 338 aa28.37■■■□□ 2.13
USP48-214ENST00000532737 IRX5P78411 483 aaPredicted RBP28.37■■■□□ 2.13
USP48-214ENST00000532737 HMGN5P82970 282 aaKnown RBP28.37■■■□□ 2.13
USP48-214ENST00000532737 DUSP28Q4G0W2 176 aa28.37■■■□□ 2.13
USP48-214ENST00000532737 UBE2Q1Q7Z7E8 422 aa28.37■■■□□ 2.13
USP48-214ENST00000532737 M0R2N6 131 aa28.36■■■□□ 2.13
USP48-214ENST00000532737 ADAMTS4O75173 837 aa28.36■■■□□ 2.13
USP48-214ENST00000532737 TXNP10599 105 aaKnown RBP28.36■■■□□ 2.13
USP48-214ENST00000532737 TTLL4Q14679 1199 aa28.36■■■□□ 2.13
USP48-214ENST00000532737 INPP4AQ96PE3 977 aaPredicted RBP28.36■■■□□ 2.13
USP48-214ENST00000532737 SYNRGQ9UMZ2 1314 aa28.36■■■□□ 2.13
USP48-214ENST00000532737 H0YGN5 161 aa28.35■■■□□ 2.13
USP48-214ENST00000532737 DYNC1LI2O43237 492 aaPredicted RBP28.35■■■□□ 2.13
USP48-214ENST00000532737 STAM2O75886 525 aa28.35■■■□□ 2.13
USP48-214ENST00000532737 MYCNP04198 464 aaPredicted RBP28.35■■■□□ 2.13
USP48-214ENST00000532737 LRRC41Q15345 812 aa28.35■■■□□ 2.13
USP48-214ENST00000532737 ANKLE1Q8NAG6 615 aa28.35■■■□□ 2.13
USP48-214ENST00000532737 ARRDC4Q8NCT1 418 aa28.35■■■□□ 2.13
USP48-214ENST00000532737 COPS5Q92905 334 aa28.35■■■□□ 2.13
USP48-214ENST00000532737 UPF3AQ9H1J1 476 aaKnown RBP28.35■■■□□ 2.13
USP48-214ENST00000532737 COLQQ9Y215 455 aaPredicted RBP28.35■■■□□ 2.13
USP48-214ENST00000532737 MYADML2A6NDP7 307 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 FARP2O94887 1054 aaPredicted RBP28.34■■■□□ 2.13
USP48-214ENST00000532737 ITGB5P18084 799 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 FXR1P51114 621 aaKnown RBP eCLIP28.34■■■□□ 2.135e-7■■■■□ 25.7
USP48-214ENST00000532737 GJA9P57773 515 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 ARHGAP4P98171 946 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 LY6KQ17RY6 165 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 TLK2Q86UE8 772 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 DIS3LQ8TF46 1054 aaKnown RBP28.34■■■□□ 2.13
USP48-214ENST00000532737 CRYGNQ8WXF5 182 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 SNX21Q969T3 373 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 DDX41Q9UJV9 622 aaKnown RBP28.34■■■□□ 2.13
USP48-214ENST00000532737 UBIAD1Q9Y5Z9 338 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 MRVI1Q9Y6F6 885 aa28.34■■■□□ 2.13
USP48-214ENST00000532737 CTAGE5O15320 804 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 SEMA3FQ13275 785 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 CUL4AQ13619 759 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 KRT40Q6A162 431 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 FAM184AQ8NB25 1140 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 KLHDC9Q8NEP7 349 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 OXER1Q8TDS5 423 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 Q9Y3F1 56 aa28.33■■■□□ 2.13
USP48-214ENST00000532737 NKRFO15226 690 aaKnown RBP eCLIP28.32■■■□□ 2.12
USP48-214ENST00000532737 C6orf222P0C671 652 aaPredicted RBP28.32■■■□□ 2.12
USP48-214ENST00000532737 ICAM3P32942 547 aa28.32■■■□□ 2.12
USP48-214ENST00000532737 NKX3-2P78367 333 aa28.32■■■□□ 2.12
USP48-214ENST00000532737 TRIM29Q14134 588 aa28.32■■■□□ 2.12
USP48-214ENST00000532737 GNPTABQ3T906 1256 aa28.32■■■□□ 2.12
USP48-214ENST00000532737 RNF180Q86T96 592 aa28.32■■■□□ 2.12
USP48-214ENST00000532737 PAWRQ96IZ0 340 aaKnown RBP28.32■■■□□ 2.12
USP48-214ENST00000532737 AP5M1Q9H0R1 490 aa28.32■■■□□ 2.12
USP48-214ENST00000532737 FRMPD3Q5JV73 1810 aa28.32■■■□□ 2.12
USP48-214ENST00000532737 SPATA31C2B4DYI2 1134 aa28.31■■■□□ 2.12
USP48-214ENST00000532737 DNM1LO00429 736 aa28.31■■■□□ 2.12
USP48-214ENST00000532737 SP2Q02086 613 aa28.31■■■□□ 2.12
USP48-214ENST00000532737 GUCY1B3Q02153 619 aa28.31■■■□□ 2.12
USP48-214ENST00000532737 KCNV1Q6PIU1 500 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms