RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 SPATA31A5Q5VU36 1347 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 SPATA31A7Q8IWB4 1347 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 XPAP23025 273 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 HOXA13P31271 388 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 LIFRP42702 1097 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF445P59923 1031 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 SLC7A3Q8WY07 619 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 LARP4BQ92615 738 aaKnown RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 NAPGQ99747 312 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-232ENST00000532649 IMPACTQ9P2X3 320 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
CTNND1-232ENST00000532649 PTPRUQ92729 1446 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 PNMA6FA0A0J9YX94 578 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 ZNF131P52739 623 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 Q3C1V9 767 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 HS1BP3Q53T59 392 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.54□□□□□ -0.886e-14■□□□□ 9.9
CTNND1-232ENST00000532649 STAG1Q8WVM7 1258 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 POMGNT1Q8WZA1 660 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 GJA10Q969M2 543 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 CCDC127Q96BQ5 260 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 CDHR1Q96JP9 859 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 APOL6Q9BWW8 343 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 UTP11Q9Y3A2 253 aaKnown RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 TMEM191BP0C7N4 346 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 TUBB4BP68371 445 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 TSTA3Q13630 321 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 SEPT8Q92599 483 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 BCAP29Q9UHQ4 241 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 CPS1P31327 1500 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 FRMPD1Q5SYB0 1578 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 SLC39A14Q15043 492 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 NECTIN1Q15223 517 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 SKA2Q8WVK7 121 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 NUCKS1Q9H1E3 243 aaKnown RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 KIF9Q9HAQ2 790 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 C1orf112Q9NSG2 853 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 ZHX2Q9Y6X8 837 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 PREX1Q8TCU6 1659 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 A0A0G2JLW4 131 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 ATF7P17544 494 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 KIF23Q02241 960 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 ADAM9Q13443 819 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 ARHGAP24Q8N264 748 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 TRIML1Q8N9V2 468 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 XPO4Q9C0E2 1151 aaKnown RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 VCX3AQ9NNX9 186 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 HNRNPDLO14979 420 aaKnown RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 ACTN4O43707 911 aaKnown RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 PPP6R2O75170 966 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 PLEKHA8P1O95397 391 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 EIF2AK2P19525 551 aaKnown RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 STAT1P42224 750 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-232ENST00000532649 DGKHQ86XP1 1220 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 SLF1Q9BQI6 1058 aa9.54□□□□□ -0.88
CTNND1-232ENST00000532649 NEDD4P46934 1319 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 N4BP1O75113 896 aaKnown RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 PPP2R5AQ15172 486 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 FAM83BQ5T0W9 1011 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 TBC1D10CQ8IV04 446 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 LMNTD2Q8IXW0 634 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 AK8Q96MA6 479 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 MAGEF1Q9HAY2 307 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 TYW5A2RUC4 315 aaKnown RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 ZEB2O60315 1214 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 TRIM28Q13263 835 aaKnown RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 HHATQ5VTY9 493 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 GBP6Q6ZN66 633 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 NBPF11Q86T75 865 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 APOBEC3FQ8IUX4 373 aaKnown RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 MCUR1Q96AQ8 359 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 MEIS1O00470 390 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 ATP2A3Q93084 1043 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 CHAMP1Q96JM3 812 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 FAM84BQ96KN1 310 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 CEP170P1Q96L14 293 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 RPS6KC1Q96S38 1066 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 JPH2Q9BR39 696 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 BAG5Q9UL15 447 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 INO80B-WBP1J3KQ70 363 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 SEPT2Q15019 361 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 INO80BQ9C086 356 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 CUEDC2Q9H467 287 aa9.53□□□□□ -0.88
CTNND1-232ENST00000532649 DCP1AQ9NPI6 582 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 IPO11Q9UI26 975 aaKnown RBP9.53□□□□□ -0.88
CTNND1-232ENST00000532649 USP17L5A8MUK1 530 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 CACNB1Q02641 598 aaPredicted RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms