RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 HOMER2Q9NSB8 354 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 TRPC6Q9Y210 931 aa7.46□□□□□ -1.21
TGFBR3-209ENST00000532540 KLF18A0A0U1RQI7 1052 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 EIF4E1BA6NMX2 242 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 LRRIQ3A6PVS8 624 aaPredicted RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 FLOT1O75955 427 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 HSPD1P10809 573 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 PDHBP11177 359 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 TFAP4Q01664 338 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 TDRD12Q587J7 1177 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 SOGA3Q5TF21 947 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 ANGEL2Q5VTE6 544 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 CCDC174Q6PII3 467 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 TRIM22Q8IYM9 498 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 MSL3Q8N5Y2 521 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 CUL5Q93034 780 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 TSGA10Q9BZW7 698 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 IL25Q9H293 177 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 SLC12A7Q9Y666 1083 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 MAST3O60307 1309 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 GMNCA6NCL1 334 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 SLC27A2O14975 620 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 PRC1O43663 620 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 EVI5O60447 810 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 PPFIA2O75334 1257 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 CCT6AP40227 531 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 SEPT7Q16181 437 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 ANO1Q5XXA6 986 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 KRT26Q7Z3Y9 468 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 VSIG1Q86XK7 387 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 TRMT44Q8IYL2 757 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 TEKT4Q8WW24 435 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 BPIFA3Q9BQP9 254 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 PLA2G12BQ9BX93 195 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 CPVLQ9H3G5 476 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.46□□□□□ -1.221e-7■■■■■ 29.1
TGFBR3-209ENST00000532540 RRAGCQ9HB90 399 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 NOD2Q9HC29 1040 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 RAB21Q9UL25 225 aa7.46□□□□□ -1.22
TGFBR3-209ENST00000532540 TRIM75PA6NK02 468 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 CTCFP49711 727 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 TGFB2P61812 414 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 UBXN1Q04323 297 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 NFIAQ12857 509 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 MAP7D1Q3KQU3 841 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 MFSD4BQ5TF39 518 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 NAA35Q5VZE5 725 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 STYK1Q6J9G0 422 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 MYLK4Q86YV6 388 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 IFNL3Q8IZI9 196 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 PRMT6Q96LA8 375 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 TMEM39BQ9GZU3 492 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 GGA3Q9NZ52 723 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 CCDC189A1A4V9 331 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 CFAP73A6NFT4 308 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 HGSO14964 777 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 PFKFB1P16118 471 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 LMNB1P20700 586 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 LSP1P33241 339 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 GUCY1A3Q02108 690 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 ADCK5Q3MIX3 580 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 TRIM65Q6PJ69 517 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 DAAM2Q86T65 1068 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 GSPT2Q8IYD1 628 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 ACRBPQ8NEB7 543 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 STMN2Q93045 179 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 FGD4Q96M96 766 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 PANX2Q96RD6 677 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 LSG1Q9H089 658 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 BIN2Q9UBW5 565 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 NMT2O60551 498 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 PDHA1P08559 390 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 CTNNA1P35221 906 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 RESTQ13127 1097 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 MTMR3Q13615 1198 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 FAM133BQ5BKY9 247 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 IFIT1BQ5T764 474 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 CC2D2BQ6DHV5 1058 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 SYCP3Q8IZU3 236 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 NCOA7Q8NI08 942 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 FTOQ9C0B1 505 aaKnown RBP eCLIP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 ADGRG1Q9Y653 693 aa7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 EPN1Q9Y6I3 576 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-209ENST00000532540 MRC1P22897 1456 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 TARSL2A2RTX5 802 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 SMIM23A6NLE4 172 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 GOLGA8AA7E2F4 631 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 AHCYL1O43865 530 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 AFMP43652 599 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 TNNI2P48788 182 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 PNOCQ13519 176 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 IFI16Q16666 785 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 THEMIS2Q5TEJ8 643 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 RBM43Q6ZSC3 357 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 HOOK3Q86VS8 718 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 PSMB7Q99436 277 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 VPS16Q9H269 839 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms