RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RBM8AQ9Y5S9 174 aaKnown RBP25.84■■□□□ 1.73
TRAPPC4-210ENST00000531290 LCTP09848 1927 aa25.84■■□□□ 1.73
TRAPPC4-210ENST00000531290 PNMA6FA0A0J9YX94 578 aa25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 GCOM1H8Y6P7 765 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 PFKMP08237 780 aa25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 POLR2MP0CAP2 368 aa25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 HOXA13P31271 388 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 LAMC2Q13753 1193 aa25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 DGKDQ16760 1214 aa25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 PDCD2LQ9BRP1 358 aa25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 SLC4A7Q9Y6M7 1214 aa25.83■■□□□ 1.73
TRAPPC4-210ENST00000531290 ZBBXA8MT70 800 aa25.82■■□□□ 1.72
TRAPPC4-210ENST00000531290 BFSP2Q13515 415 aa25.82■■□□□ 1.72
TRAPPC4-210ENST00000531290 DEFB128Q7Z7B8 93 aa25.82■■□□□ 1.72
TRAPPC4-210ENST00000531290 DHX37Q8IY37 1157 aaKnown RBP25.82■■□□□ 1.72
TRAPPC4-210ENST00000531290 IGDCC4Q8TDY8 1250 aa25.82■■□□□ 1.72
TRAPPC4-210ENST00000531290 CYTH3O43739 400 aa25.81■■□□□ 1.72
TRAPPC4-210ENST00000531290 SLC35G1Q2M3R5 365 aa25.81■■□□□ 1.72
TRAPPC4-210ENST00000531290 KCNV1Q6PIU1 500 aa25.81■■□□□ 1.72
TRAPPC4-210ENST00000531290 CASC1Q6TDU7 716 aa25.81■■□□□ 1.72
TRAPPC4-210ENST00000531290 VSIG10LQ86VR7 867 aa25.81■■□□□ 1.72
TRAPPC4-210ENST00000531290 MB21D2Q8IYB1 491 aaPredicted RBP25.81■■□□□ 1.72
TRAPPC4-210ENST00000531290 EMID1Q96A84 441 aaPredicted RBP25.81■■□□□ 1.72
TRAPPC4-210ENST00000531290 PITPNM1O00562 1244 aa25.8■■□□□ 1.72
TRAPPC4-210ENST00000531290 RFC2P35250 354 aa25.8■■□□□ 1.72
TRAPPC4-210ENST00000531290 ANTXR2P58335 489 aa25.8■■□□□ 1.72
TRAPPC4-210ENST00000531290 PTGISQ16647 500 aa25.8■■□□□ 1.72
TRAPPC4-210ENST00000531290 FCHSD1Q86WN1 690 aa25.8■■□□□ 1.72
TRAPPC4-210ENST00000531290 PIBF1Q8WXW3 757 aa25.8■■□□□ 1.72
TRAPPC4-210ENST00000531290 IQCF3P0C7M6 154 aa25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 ACTN1P12814 892 aa25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 CCND2P30279 289 aa25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 KIF5BP33176 963 aa25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 PGM5Q15124 567 aa25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 CTCFLQ8NI51 663 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 GAS2L1Q99501 681 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 SLC28A3Q9HAS3 691 aa25.79■■□□□ 1.72
TRAPPC4-210ENST00000531290 SESTD1Q86VW0 696 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 TMTC2Q8N394 836 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 CCDC155Q8N6L0 562 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 C7orf31Q8N865 590 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 PPTC7Q8NI37 304 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 KAT2BQ92831 832 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 VWCEQ96DN2 955 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 MAP3K14Q99558 947 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 MTA3Q9BTC8 594 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 KATNAL1Q9BW62 490 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 FTOQ9C0B1 505 aaKnown RBP eCLIP25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 NKX2-4Q9H2Z4 354 aa25.78■■□□□ 1.72
TRAPPC4-210ENST00000531290 PRC1O43663 620 aa25.77■■□□□ 1.72
TRAPPC4-210ENST00000531290 TGFB3P10600 412 aa25.77■■□□□ 1.72
TRAPPC4-210ENST00000531290 ATP2A2P16615 1042 aaKnown RBP25.77■■□□□ 1.72
TRAPPC4-210ENST00000531290 MCM5P33992 734 aa25.77■■□□□ 1.72
TRAPPC4-210ENST00000531290 NFXL1Q6ZNB6 911 aa25.77■■□□□ 1.72
TRAPPC4-210ENST00000531290 ZNF654Q8IZM8 581 aa25.77■■□□□ 1.72
TRAPPC4-210ENST00000531290 LY9Q9HBG7 655 aa25.77■■□□□ 1.72
TRAPPC4-210ENST00000531290 PPFIA4O75335 1185 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 RGS20O76081 388 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 DDAH1O94760 285 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 PSEN2P49810 448 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 CELF3Q5SZQ8 465 aaKnown RBP25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 GDF6Q6KF10 455 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 IL31RAQ8NI17 732 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 CAGE1Q8TC20 777 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 RRP36Q96EU6 259 aaKnown RBP25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 SPATA33Q96N06 139 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 LZTS2Q9BRK4 669 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 ESYT1Q9BSJ8 1104 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 LSG1Q9H089 658 aaKnown RBP25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 PRDM12Q9H4Q4 367 aa25.76■■□□□ 1.71
TRAPPC4-210ENST00000531290 CCDC69A6NI79 296 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 GNAQP50148 359 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 RABGGTBP53611 331 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 MYSM1Q5VVJ2 828 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 TMEM87BQ96K49 555 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 ALG1Q9BT22 464 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 MYL10Q9BUA6 226 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 YBX2Q9Y2T7 364 aaKnown RBP25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 CDH23Q9H251 3354 aa25.75■■□□□ 1.71
TRAPPC4-210ENST00000531290 SLC27A2O14975 620 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 SORBS3O60504 671 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 GGPS1O95749 300 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 SMARCA1P28370 1054 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 MFSD10Q14728 455 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 AFAP1L1Q8TED9 768 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 ZFP91Q96JP5 570 aaPredicted RBP25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 SPZ1Q9BXG8 430 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 MLXIPQ9HAP2 919 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 ANO2Q9NQ90 1003 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 HDAC6Q9UBN7 1215 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 SEC63Q9UGP8 760 aaKnown RBP25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 GTF2IRD1Q9UHL9 959 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 PCDHA11Q9Y5I1 949 aa25.74■■□□□ 1.71
TRAPPC4-210ENST00000531290 F2P00734 622 aa25.73■■□□□ 1.71
TRAPPC4-210ENST00000531290 ZNF286BP0CG31 522 aa25.73■■□□□ 1.71
TRAPPC4-210ENST00000531290 KIAA0753Q2KHM9 967 aa25.73■■□□□ 1.71
TRAPPC4-210ENST00000531290 GNPTABQ3T906 1256 aa25.73■■□□□ 1.71
TRAPPC4-210ENST00000531290 CUL5Q93034 780 aa25.73■■□□□ 1.71
TRAPPC4-210ENST00000531290 COL25A1Q9BXS0 654 aaPredicted RBP25.73■■□□□ 1.71
TRAPPC4-210ENST00000531290 UNC80Q8N2C7 3258 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms