RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 HAND2P61296 217 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 WDR5P61964 334 aaKnown RBP10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 ARHGAP1Q07960 439 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 PDE4DQ08499 809 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 TRAF7Q6Q0C0 670 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 WNT8BQ93098 351 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 ZNF318Q5VUA4 2279 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 LOXHD1Q8IVV2 1947 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 ZMYM6O95789 1325 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 NEDD4P46934 1319 aa10.82□□□□□ -0.68
CHMP4A-205ENST00000531158 KIAA1671Q9BY89 1806 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 NKRFO15226 690 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 NBNO60934 754 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 HSPD1P10809 573 aaKnown RBP10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 ACTN1P12814 892 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 PTPN11Q06124 597 aaPredicted RBP10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 HIC1Q14526 733 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 MBTPS1Q14703 1052 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 PTGISQ16647 500 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 USH1GQ495M9 461 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 RRP12Q5JTH9 1297 aaKnown RBP10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 GJD3Q8N144 294 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 DNERQ8NFT8 737 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 GDPD5Q8WTR4 605 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 AFG1LQ8WV93 481 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 HELLSQ9NRZ9 838 aa10.81□□□□□ -0.68
CHMP4A-205ENST00000531158 USP34Q70CQ2 3546 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 BAIAP3O94812 1187 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 CXCL10P02778 98 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 SSTR3P32745 418 aaPredicted RBP10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 RBL2Q08999 1139 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 NMIQ13287 307 aaPredicted RBP10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 LY6KQ17RY6 165 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 TRIM71Q2Q1W2 868 aaKnown RBP10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 SESTD1Q86VW0 696 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 SYTL5Q8TDW5 730 aaPredicted RBP10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 EVI5LQ96CN4 794 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 TAAR1Q96RJ0 339 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 ZKSCAN3Q9BRR0 538 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 FTOQ9C0B1 505 aaKnown RBP eCLIP10.8□□□□□ -0.681e-12■■■■□ 25.8
CHMP4A-205ENST00000531158 UBA5Q9GZZ9 404 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 GPHNQ9NQX3 736 aaPredicted RBP10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 TOMM22Q9NS69 142 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 KAT6AQ92794 2004 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 RAD50Q92878 1312 aa10.8□□□□□ -0.68
CHMP4A-205ENST00000531158 LINC01553A4QN01 128 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 OPLAHO14841 1288 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 KPNA6O60684 536 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 PDE1AP54750 535 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 CHMP4BP1P59074 171 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 BFSP2Q13515 415 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 CDC37Q16543 378 aaPredicted RBP10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 LRRC8DQ7L1W4 858 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 RETREG2Q8NC44 543 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 RGS22Q8NE09 1264 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 AFAP1L1Q8TED9 768 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 ANKS1AQ92625 1134 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 SUGCTQ9HAC7 445 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 MTUS1Q9ULD2 1270 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 COL4A6Q14031 1691 aa10.79□□□□□ -0.68
CHMP4A-205ENST00000531158 HAS3O00219 553 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 RGS20O76081 388 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 GJB5O95377 273 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 ZNF286BP0CG31 522 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 CKBP12277 381 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 SELPP16109 830 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 ZNF200P98182 395 aaPredicted RBP10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 MCMDC2Q4G0Z9 681 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 SEPT14Q6ZU15 432 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 CHST3Q7LGC8 479 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 CAGE1Q8TC20 777 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 TTC14Q96N46 770 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 OSBPL7Q9BZF2 842 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 HDAC6Q9UBN7 1215 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 GTF2IRD1Q9UHL9 959 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 DDX41Q9UJV9 622 aaKnown RBP10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 NOD1Q9Y239 953 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
CHMP4A-205ENST00000531158 PPP1R11O60927 126 aaPredicted RBP10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 F2P00734 622 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 GH1P01241 217 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 KCNJ6P48051 423 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 QRICH1Q2TAL8 776 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 ANKRD45Q5TZF3 282 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 CNKSR3Q6P9H4 555 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 FAM178BQ8IXR5 827 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 ADGRF4Q8IZF3 695 aa10.77□□□□□ -0.69
CHMP4A-205ENST00000531158 CFAP54Q96N23 3096 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 KIF28PB7ZC32 967 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 GFRA3O60609 400 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 HOXD8P13378 290 aaPredicted RBP10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 EIF2AK2P19525 551 aaKnown RBP10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 PSEN2P49810 448 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 ERVK-21P61565 698 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 SLC35G1Q2M3R5 365 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms