RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 MCTP1Q6DN14 999 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 PIK3AP1Q6ZUJ8 805 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 NOSTRINQ8IVI9 506 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 TBCKQ8TEA7 893 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 KATNBL1Q9H079 304 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 ABHD16BQ9H3Z7 469 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 NRBP1Q9UHY1 535 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 MTMR6Q9Y217 621 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 FRMPD3Q5JV73 1810 aa19.3■□□□□ 0.68
SF3B2-211ENST00000531041 KIF28PB7ZC32 967 aa19.3■□□□□ 0.68
SF3B2-211ENST00000531041 VTA1Q9NP79 307 aa19.3■□□□□ 0.68
SF3B2-211ENST00000531041 CNPY2Q9Y2B0 182 aa19.3■□□□□ 0.68
SF3B2-211ENST00000531041 EDIL3O43854 480 aa19.29■□□□□ 0.68
SF3B2-211ENST00000531041 INF2Q27J81 1249 aa19.29■□□□□ 0.68
SF3B2-211ENST00000531041 SLC9C1Q4G0N8 1177 aa19.29■□□□□ 0.68
SF3B2-211ENST00000531041 MAP3K21Q5TCX8 1036 aa19.29■□□□□ 0.68
SF3B2-211ENST00000531041 FAM205CA6NFA0 338 aa19.28■□□□□ 0.68
SF3B2-211ENST00000531041 CYBAP13498 195 aa19.28■□□□□ 0.68
SF3B2-211ENST00000531041 CIITAP33076 1130 aa19.28■□□□□ 0.68
SF3B2-211ENST00000531041 CACNB2Q08289 660 aaPredicted RBP19.28■□□□□ 0.68
SF3B2-211ENST00000531041 TRIM32Q13049 653 aa19.28■□□□□ 0.68
SF3B2-211ENST00000531041 ACVR2BQ13705 512 aa19.28■□□□□ 0.68
SF3B2-211ENST00000531041 NEK8Q86SG6 692 aa19.28■□□□□ 0.68
SF3B2-211ENST00000531041 INPP4AQ96PE3 977 aaPredicted RBP19.28■□□□□ 0.68
SF3B2-211ENST00000531041 UBIAD1Q9Y5Z9 338 aa19.28■□□□□ 0.68
SF3B2-211ENST00000531041 RGS20O76081 388 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 INHAP05111 366 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 ZNF865P0CJ78 1059 aaPredicted RBP19.27■□□□□ 0.68
SF3B2-211ENST00000531041 PRKAR2AP13861 404 aaKnown RBP19.27■□□□□ 0.68
SF3B2-211ENST00000531041 DDIT3P35638 169 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 PRAMEF19Q5SWL8 479 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 TAPT1Q6NXT6 567 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 MOXD1Q6UVY6 613 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 EEPD1Q7L9B9 569 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 BRAPQ7Z569 592 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 SH3TC2Q8TF17 1288 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.68
SF3B2-211ENST00000531041 TCHHQ07283 1943 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 CENPFP49454 3210 aa19.27■□□□□ 0.68
SF3B2-211ENST00000531041 CYP3A7-CYP3A51PA0A087WV96 503 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 RBM47A0AV96 593 aaKnown RBP19.26■□□□□ 0.67
SF3B2-211ENST00000531041 CYP3A7P24462 503 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 ZNF76P36508 570 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 GNPTABQ3T906 1256 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 CEP55Q53EZ4 464 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 NIPA1Q7RTP0 329 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 FBXO16Q8IX29 292 aaPredicted RBP19.26■□□□□ 0.67
SF3B2-211ENST00000531041 ZFP91Q96JP5 570 aaPredicted RBP19.26■□□□□ 0.67
SF3B2-211ENST00000531041 MXRA8Q9BRK3 442 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 ZSCAN16Q9H4T2 348 aaPredicted RBP19.26■□□□□ 0.67
SF3B2-211ENST00000531041 RTEL1Q9NZ71 1219 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 WDR81Q562E7 1941 aa19.26■□□□□ 0.67
SF3B2-211ENST00000531041 FAM86B1E9PN63 330 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 MEIS1O00470 390 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 FAM86B2P0C5J1 330 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 ZSCAN22P10073 491 aaPredicted RBP19.25■□□□□ 0.67
SF3B2-211ENST00000531041 ITGB5P18084 799 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 TRAPPC10P48553 1259 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 RESTQ13127 1097 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 PKP1Q13835 747 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 LETM2Q2VYF4 491 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 PPP4R3AQ6IN85 833 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 FERMT3Q86UX7 667 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 TRPV1Q8NER1 839 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 GPRASP2Q96D09 838 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 MBOAT7Q96N66 472 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 NAP1L4Q99733 375 aaKnown RBP19.25■□□□□ 0.67
SF3B2-211ENST00000531041 MCOLN1Q9GZU1 580 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 JADE2Q9NQC1 790 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 IGLV3-22A0A075B6J6 115 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 MAFGO15525 162 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 TGFB3P10600 412 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 GCFC2P16383 781 aaKnown RBP19.25■□□□□ 0.67
SF3B2-211ENST00000531041 ICAM3P32942 547 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 CCDC144BQ3MJ40 725 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 IQSEC1Q6DN90 963 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 KCNV1Q6PIU1 500 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 SEPT14Q6ZU15 432 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 NLRX1Q86UT6 975 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 CYP2W1Q8TAV3 490 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 SCFD2Q8WU76 684 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 ARMC5Q96C12 935 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 WDR11Q9BZH6 1224 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 PDGFCQ9NRA1 345 aa19.25■□□□□ 0.67
SF3B2-211ENST00000531041 ZHX1Q9UKY1 873 aaPredicted RBP19.25■□□□□ 0.67
SF3B2-211ENST00000531041 NOL7Q9UMY1 257 aaKnown RBP19.25■□□□□ 0.67
SF3B2-211ENST00000531041 SPATA31C2B4DYI2 1134 aa19.24■□□□□ 0.67
SF3B2-211ENST00000531041 FIBPO43427 364 aa19.24■□□□□ 0.67
SF3B2-211ENST00000531041 RILPL1Q5EBL4 403 aa19.24■□□□□ 0.67
SF3B2-211ENST00000531041 CCDC62Q6P9F0 684 aa19.24■□□□□ 0.67
SF3B2-211ENST00000531041 CDHR1Q96JP9 859 aa19.24■□□□□ 0.67
SF3B2-211ENST00000531041 HMX1Q9NP08 348 aaPredicted RBP19.24■□□□□ 0.67
SF3B2-211ENST00000531041 SEPT4O43236 478 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 CCNT1O60563 726 aaKnown RBP19.23■□□□□ 0.67
SF3B2-211ENST00000531041 TDP2O95551 362 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 BRD1O95696 1058 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 AKR1A1P14550 325 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 CCND3P30281 292 aaPredicted RBP19.23■□□□□ 0.67
SF3B2-211ENST00000531041 ADCYAP1R1P41586 468 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 TOB1P50616 345 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms