RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 PCDHB6Q9Y5E3 794 aa11.39□□□□□ -0.59
RPUSD4-205ENST00000530903 PLXNB2O15031 1838 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 SLC25A27O95847 323 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 ERCC3P19447 782 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 TM4SF4P48230 202 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 RPS6P62753 249 aaKnown RBP11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 UBXN2AP68543 259 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 BAATQ14032 418 aaPredicted RBP11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 SF3A1Q15459 793 aaKnown RBP11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 ZNF174Q15697 407 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 LETM2Q2VYF4 491 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 TTC38Q5R3I4 469 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 WDR78Q5VTH9 848 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 ANO1Q5XXA6 986 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 NEK8Q86SG6 692 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 GPRC5AQ8NFJ5 357 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 SYTL5Q8TDW5 730 aaPredicted RBP11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 SPATA32Q96LK8 384 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 ZCCHC17Q9NP64 241 aaKnown RBP11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 COL20A1Q9P218 1284 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 CPA4Q9UI42 421 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 CFAP45Q9UL16 551 aa11.38□□□□□ -0.59
RPUSD4-205ENST00000530903 ADGRA2Q96PE1 1338 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 FOSP01100 380 aaPredicted RBP11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 MCM7P33993 719 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 CCNA1P78396 465 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 GHRHRQ02643 423 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 STK38Q15208 465 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 ATL3Q6DD88 541 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 MCTP2Q6DN12 878 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 LEO1Q8WVC0 666 aaPredicted RBP11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 WNT2BQ93097 391 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 PURBQ96QR8 312 aaKnown RBP11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 PORCNQ9H237 461 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 EFCC1Q9HA90 598 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 POLR3EQ9NVU0 708 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 CYP39A1Q9NYL5 469 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 RTEL1Q9NZ71 1219 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 FBXO40Q9UH90 709 aa11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 ZNFX1Q9P2E3 1918 aaKnown RBP11.37□□□□□ -0.59
RPUSD4-205ENST00000530903 EDIL3O43854 480 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 EVI5O60447 810 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 CCNT1O60563 726 aaKnown RBP11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 TDP2O95551 362 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 MCM4P33991 863 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 COPB2P35606 906 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 NASPP49321 788 aaPredicted RBP11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 VEGFBP49765 207 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 CRHR2Q13324 411 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 FAM110CQ1W6H9 321 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 CCAR1Q8IX12 1150 aaKnown RBP11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 SHCBP1Q8NEM2 672 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 TAAR1Q96RJ0 339 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 ADAM33Q9BZ11 813 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 SCAND2PQ9GZW5 306 aaPredicted RBP11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 MROH8Q9H579 483 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 PFASO15067 1338 aa11.36□□□□□ -0.59
RPUSD4-205ENST00000530903 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 PRPF40AO75400 957 aaKnown RBP11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 YEATS4O95619 227 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 BCRP11274 1271 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 EIF2AK2P19525 551 aaKnown RBP11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 MARCKSP29966 332 aaPredicted RBP11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 SREBF1P36956 1147 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 ARHGAP4P98171 946 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 SLC39A14Q15043 492 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 PTPAQ15257 358 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 SAMD3Q8N6K7 520 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 LINC00301Q8NCQ3 95 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 MMP19Q99542 508 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 EHMT1Q9H9B1 1298 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 MAP3K20Q9NYL2 800 aaKnown RBP11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 MRVI1Q9Y6F6 885 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 RPTORQ8N122 1335 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 PLXNA1Q9UIW2 1896 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 SPTLC2O15270 562 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 TLR2O60603 784 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 ME1P48163 572 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 CNTN2Q02246 1040 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 ARHGEF16Q5VV41 709 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 C17orf99Q6UX52 265 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 IL31RAQ8NI17 732 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 CEP131Q9UPN4 1083 aa11.35□□□□□ -0.59
RPUSD4-205ENST00000530903 THSD7BQ9C0I4 1608 aa11.34□□□□□ -0.59
RPUSD4-205ENST00000530903 GOLGA8CPA6NN73 597 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms