RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 JAG1P78504 1218 aa10.53□□□□□ -0.72
CSDE1-213ENST00000530784 CCDC103Q8IW40 242 aa10.53□□□□□ -0.72
CSDE1-213ENST00000530784 TMEM145Q8NBT3 493 aa10.53□□□□□ -0.72
CSDE1-213ENST00000530784 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.72
CSDE1-213ENST00000530784 ZC3H12DA2A288 527 aaKnown RBP10.52□□□□□ -0.73
CSDE1-213ENST00000530784 CPP00450 1065 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 EPHB3P54753 998 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 KCNA10Q16322 511 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 DENND5AQ6IQ26 1287 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 KRTAP1-3Q8IUG1 177 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
CSDE1-213ENST00000530784 RXFP1Q9HBX9 757 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 MSRB2Q9Y3D2 182 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 PTPRMP28827 1452 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 ADAMTSL3P82987 1691 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 ARHGEF40Q8TER5 1519 aa10.52□□□□□ -0.73
CSDE1-213ENST00000530784 FANCAO15360 1455 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 DENND4BO75064 1496 aaPredicted RBP10.51□□□□□ -0.73
CSDE1-213ENST00000530784 F8W031 263 aaPredicted RBP10.51□□□□□ -0.73
CSDE1-213ENST00000530784 FUCA1P04066 466 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 CDR1P51861 262 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 NBPF6Q5VWK0 638 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 E4F1Q66K89 784 aaPredicted RBP10.51□□□□□ -0.73
CSDE1-213ENST00000530784 IQCEQ6IPM2 695 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 ZC3H14Q6PJT7 736 aaKnown RBP10.51□□□□□ -0.73
CSDE1-213ENST00000530784 USP33Q8TEY7 942 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 C1orf159Q96HA4 380 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 SGSM3Q96HU1 749 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 NBPF4Q96M43 638 aa10.51□□□□□ -0.73
CSDE1-213ENST00000530784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.51□□□□□ -0.73
CSDE1-213ENST00000530784 ARID4BQ4LE39 1312 aaPredicted RBP10.51□□□□□ -0.73
CSDE1-213ENST00000530784 MEFVO15553 781 aaPredicted RBP10.5□□□□□ -0.73
CSDE1-213ENST00000530784 CFPP27918 469 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 RBL2Q08999 1139 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 LDHDQ86WU2 507 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 DIO2Q92813 273 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 ARMC5Q96C12 935 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 HIRIP3Q9BW71 556 aaPredicted RBP10.5□□□□□ -0.73
CSDE1-213ENST00000530784 BTG4Q9NY30 223 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■■■□□ 16.5
CSDE1-213ENST00000530784 TTC37Q6PGP7 1564 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 BCORL1Q5H9F3 1711 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 AKNAQ7Z591 1439 aa10.5□□□□□ -0.73
CSDE1-213ENST00000530784 CDK13Q14004 1512 aaKnown RBP10.49□□□□□ -0.73
CSDE1-213ENST00000530784 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 CCDC85CA6NKD9 419 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 N4BP3O15049 544 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 LINC00310P59036 64 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 PRR5P85299 388 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 HSP90AA2PQ14568 343 aaPredicted RBP10.49□□□□□ -0.73
CSDE1-213ENST00000530784 CABP7Q86V35 215 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 PPIL6Q8IXY8 311 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 PLEKHO2Q8TD55 490 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 MZB1Q8WU39 189 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 TOX2Q96NM4 488 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 IER2Q9BTL4 223 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 MARCH2Q9P0N8 246 aa10.49□□□□□ -0.73
CSDE1-213ENST00000530784 DBR1Q9UK59 544 aaKnown RBP10.49□□□□□ -0.73
CSDE1-213ENST00000530784 MADDQ8WXG6 1647 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 RICTORQ6R327 1708 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 PDPK1O15530 556 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 NCKAP1LP55160 1127 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 ZNF200P98182 395 aaPredicted RBP10.48□□□□□ -0.73
CSDE1-213ENST00000530784 SLC35F1Q5T1Q4 408 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 ACBD5Q5T8D3 534 aaPredicted RBP10.48□□□□□ -0.73
CSDE1-213ENST00000530784 TEX2Q8IWB9 1127 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 LRRC56Q8IYG6 542 aaPredicted RBP10.48□□□□□ -0.73
CSDE1-213ENST00000530784 ARHGEF4Q9NR80 690 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 SIRPGQ9P1W8 387 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 PLA2G2DQ9UNK4 145 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 ZMYM4Q5VZL5 1548 aa10.48□□□□□ -0.73
CSDE1-213ENST00000530784 DLX3O60479 287 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 LCP1P13796 627 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 KCNAB2Q13303 367 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 FZD5Q13467 585 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 SSPNQ14714 243 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 TESK1Q15569 626 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 SPATC1Q76KD6 591 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 C1QL4Q86Z23 238 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 RCBTB1Q8NDN9 531 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 KCTD13Q8WZ19 329 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 AARSD1Q9BTE6 412 aaKnown RBP10.47□□□□□ -0.73
CSDE1-213ENST00000530784 CCDC113Q9H0I3 377 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 CNOT6Q9ULM6 557 aaKnown RBP10.47□□□□□ -0.73
CSDE1-213ENST00000530784 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 TIMM13Q9Y5L4 95 aaPredicted RBP10.47□□□□□ -0.73
CSDE1-213ENST00000530784 FMN1Q68DA7 1419 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 ZFYVE16Q7Z3T8 1539 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
CSDE1-213ENST00000530784 NTRK1P04629 796 aa10.46□□□□□ -0.73
CSDE1-213ENST00000530784 LTBRP36941 435 aa10.46□□□□□ -0.73
CSDE1-213ENST00000530784 RPL11P62913 178 aaKnown RBP10.46□□□□□ -0.73
CSDE1-213ENST00000530784 MAP4K2Q12851 820 aa10.46□□□□□ -0.73
CSDE1-213ENST00000530784 WWC2Q6AWC2 1192 aa10.46□□□□□ -0.73
CSDE1-213ENST00000530784 IGDCC3Q8IVU1 814 aa10.46□□□□□ -0.73
CSDE1-213ENST00000530784 NETO2Q8NC67 525 aa10.46□□□□□ -0.73
CSDE1-213ENST00000530784 SIGLEC10Q96LC7 697 aa10.46□□□□□ -0.73
CSDE1-213ENST00000530784 MAGI2Q86UL8 1455 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 POGZQ7Z3K3 1410 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 IRS2Q9Y4H2 1338 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms