RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 OPLAHO14841 1288 aa24.25■■□□□ 1.47
SMPD1-204ENST00000530395 PPP1R11O60927 126 aaPredicted RBP24.25■■□□□ 1.47
SMPD1-204ENST00000530395 CASTP20810 708 aaKnown RBP24.25■■□□□ 1.47
SMPD1-204ENST00000530395 RFC2P35250 354 aa24.25■■□□□ 1.47
SMPD1-204ENST00000530395 TMEM67Q5HYA8 995 aa24.25■■□□□ 1.47
SMPD1-204ENST00000530395 CATIPQ7Z7H3 387 aa24.25■■□□□ 1.47
SMPD1-204ENST00000530395 RETREG2Q8NC44 543 aa24.25■■□□□ 1.47
SMPD1-204ENST00000530395 RIOX1Q9H6W3 641 aa24.25■■□□□ 1.47
SMPD1-204ENST00000530395 SLC4A7Q9Y6M7 1214 aa24.25■■□□□ 1.47
SMPD1-204ENST00000530395 VCANP13611 3396 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 ZBBXA8MT70 800 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 PITPNM1O00562 1244 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 BFSP2Q13515 415 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 DGKDQ16760 1214 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 MAP4K1Q92918 833 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 EMID1Q96A84 441 aaPredicted RBP24.24■■□□□ 1.47
SMPD1-204ENST00000530395 PIGSQ96S52 555 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 GAS2L1Q99501 681 aaPredicted RBP24.24■■□□□ 1.47
SMPD1-204ENST00000530395 DDX41Q9UJV9 622 aaKnown RBP24.24■■□□□ 1.47
SMPD1-204ENST00000530395 MYO9BQ13459 2157 aa24.24■■□□□ 1.47
SMPD1-204ENST00000530395 MYCLP12524 364 aaPredicted RBP24.23■■□□□ 1.47
SMPD1-204ENST00000530395 ACTN1P12814 892 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 TROAPQ12815 778 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 LAMC2Q13753 1193 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 KCNV1Q6PIU1 500 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 STOX1Q6ZVD7 989 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 CCDC155Q8N6L0 562 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 PPP1R13LQ8WUF5 828 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 PDCD2LQ9BRP1 358 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 SENP2Q9HC62 589 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 RBM8AQ9Y5S9 174 aaKnown RBP24.23■■□□□ 1.47
SMPD1-204ENST00000530395 TAF6LQ9Y6J9 622 aa24.23■■□□□ 1.47
SMPD1-204ENST00000530395 PNMA6FA0A0J9YX94 578 aa24.22■■□□□ 1.47
SMPD1-204ENST00000530395 GCOM1H8Y6P7 765 aaPredicted RBP24.22■■□□□ 1.47
SMPD1-204ENST00000530395 POLR2MP0CAP2 368 aa24.22■■□□□ 1.47
SMPD1-204ENST00000530395 HOXA13P31271 388 aaPredicted RBP24.22■■□□□ 1.47
SMPD1-204ENST00000530395 DEFB128Q7Z7B8 93 aa24.22■■□□□ 1.47
SMPD1-204ENST00000530395 KATNAL1Q9BW62 490 aa24.22■■□□□ 1.47
SMPD1-204ENST00000530395 SLC28A3Q9HAS3 691 aa24.22■■□□□ 1.47
SMPD1-204ENST00000530395 TRIP12Q14669 1992 aaPredicted RBP24.22■■□□□ 1.47
SMPD1-204ENST00000530395 PTGISQ16647 500 aa24.21■■□□□ 1.47
SMPD1-204ENST00000530395 SESTD1Q86VW0 696 aa24.21■■□□□ 1.47
SMPD1-204ENST00000530395 DHX37Q8IY37 1157 aaKnown RBP24.21■■□□□ 1.47
SMPD1-204ENST00000530395 MB21D2Q8IYB1 491 aaPredicted RBP24.21■■□□□ 1.47
SMPD1-204ENST00000530395 PPTC7Q8NI37 304 aa24.21■■□□□ 1.47
SMPD1-204ENST00000530395 CCND2P30279 289 aa24.2■■□□□ 1.46
SMPD1-204ENST00000530395 PGM5Q15124 567 aa24.2■■□□□ 1.46
SMPD1-204ENST00000530395 SLC35G1Q2M3R5 365 aa24.2■■□□□ 1.46
SMPD1-204ENST00000530395 CASC1Q6TDU7 716 aa24.2■■□□□ 1.46
SMPD1-204ENST00000530395 CAGE1Q8TC20 777 aa24.2■■□□□ 1.46
SMPD1-204ENST00000530395 NKX2-4Q9H2Z4 354 aa24.2■■□□□ 1.46
SMPD1-204ENST00000530395 CHD7Q9P2D1 2997 aa24.2■■□□□ 1.46
SMPD1-204ENST00000530395 CYTH3O43739 400 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 IQCF3P0C7M6 154 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 ATP2A2P16615 1042 aaKnown RBP24.19■■□□□ 1.46
SMPD1-204ENST00000530395 KIF5BP33176 963 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 ANTXR2P58335 489 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 VSIG10LQ86VR7 867 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 C7orf31Q8N865 590 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 CTCFLQ8NI51 663 aaPredicted RBP24.19■■□□□ 1.46
SMPD1-204ENST00000530395 IGDCC4Q8TDY8 1250 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 KAT2BQ92831 832 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 VWCEQ96DN2 955 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 COL25A1Q9BXS0 654 aaPredicted RBP24.19■■□□□ 1.46
SMPD1-204ENST00000530395 PRDM12Q9H4Q4 367 aa24.19■■□□□ 1.46
SMPD1-204ENST00000530395 DDAH1O94760 285 aa24.18■■□□□ 1.46
SMPD1-204ENST00000530395 GDF6Q6KF10 455 aaPredicted RBP24.18■■□□□ 1.46
SMPD1-204ENST00000530395 FCHSD1Q86WN1 690 aa24.18■■□□□ 1.46
SMPD1-204ENST00000530395 AFAP1L1Q8TED9 768 aa24.18■■□□□ 1.46
SMPD1-204ENST00000530395 MAP3K14Q99558 947 aa24.18■■□□□ 1.46
SMPD1-204ENST00000530395 MTA3Q9BTC8 594 aa24.18■■□□□ 1.46
SMPD1-204ENST00000530395 FTOQ9C0B1 505 aaKnown RBP eCLIP24.18■■□□□ 1.46
SMPD1-204ENST00000530395 YBX2Q9Y2T7 364 aaKnown RBP24.18■■□□□ 1.46
SMPD1-204ENST00000530395 PCDHA11Q9Y5I1 949 aa24.18■■□□□ 1.46
SMPD1-204ENST00000530395 PSEN2P49810 448 aa24.17■■□□□ 1.46
SMPD1-204ENST00000530395 RABGGTBP53611 331 aa24.17■■□□□ 1.46
SMPD1-204ENST00000530395 ZNF654Q8IZM8 581 aa24.17■■□□□ 1.46
SMPD1-204ENST00000530395 LY9Q9HBG7 655 aa24.17■■□□□ 1.46
SMPD1-204ENST00000530395 GTF2IRD1Q9UHL9 959 aa24.17■■□□□ 1.46
SMPD1-204ENST00000530395 PRC1O43663 620 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 RGS20O76081 388 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 F2P00734 622 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 ZNF286BP0CG31 522 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 TGFB3P10600 412 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 MCM5P33992 734 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 MFSD10Q14728 455 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 CELF3Q5SZQ8 465 aaKnown RBP24.16■■□□□ 1.46
SMPD1-204ENST00000530395 MYSM1Q5VVJ2 828 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 PPP2R2DQ66LE6 453 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 IL31RAQ8NI17 732 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 PIBF1Q8WXW3 757 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 RRP36Q96EU6 259 aaKnown RBP24.16■■□□□ 1.46
SMPD1-204ENST00000530395 SPATA33Q96N06 139 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 SLC9A7Q96T83 725 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 ALG1Q9BT22 464 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 SPZ1Q9BXG8 430 aa24.16■■□□□ 1.46
SMPD1-204ENST00000530395 SPTBN5Q9NRC6 3674 aaKnown RBP24.15■■□□□ 1.46
SMPD1-204ENST00000530395 PPFIA4O75335 1185 aa24.15■■□□□ 1.46
SMPD1-204ENST00000530395 GGPS1O95749 300 aa24.15■■□□□ 1.46
SMPD1-204ENST00000530395 KIAA0753Q2KHM9 967 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms