RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 DGKDQ16760 1214 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 ENAHQ8N8S7 591 aaPredicted RBP14.14□□□□□ -0.15
USH1C-208ENST00000529563 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 ADAMTS19Q8TE59 1207 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 TBC1D5Q92609 795 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 ALG1Q9BT22 464 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 DSCC1Q9BVC3 393 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 MAF1Q9H063 256 aa14.14□□□□□ -0.15
USH1C-208ENST00000529563 TTC28Q96AY4 2481 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 GBF1Q92538 1859 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 MYCLP12524 364 aaPredicted RBP14.13□□□□□ -0.15
USH1C-208ENST00000529563 AAK1Q2M2I8 961 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 DHX37Q8IY37 1157 aaKnown RBP14.13□□□□□ -0.15
USH1C-208ENST00000529563 PHOSPHO2Q8TCD6 241 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 AFAP1L1Q8TED9 768 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 ARNTL2Q8WYA1 636 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 UHRF1Q96T88 793 aaPredicted RBP14.13□□□□□ -0.15
USH1C-208ENST00000529563 KATNAL1Q9BW62 490 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 AMNQ9BXJ7 453 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 ZSWIM5Q9P217 1185 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 VCANP13611 3396 aa14.13□□□□□ -0.15
USH1C-208ENST00000529563 ERICH2A1L162 156 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 TLL1O43897 1013 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 EIF3JO75822 258 aaKnown RBP14.12□□□□□ -0.15
USH1C-208ENST00000529563 BAIAP3O94812 1187 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 NR3C2P08235 984 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 SELPP16109 830 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 CCDC62Q6P9F0 684 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 HERC6Q8IVU3 1022 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 ANKS1AQ92625 1134 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 OSBPL3Q9H4L5 887 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 JMJD4Q9H9V9 463 aa14.12□□□□□ -0.15
USH1C-208ENST00000529563 KLRF2D3W0D1 207 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 RFXAPO00287 272 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 SORBS3O60504 671 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 PSEN2P49810 448 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 TRAF1Q13077 416 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 LAMC2Q13753 1193 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 MFSD10Q14728 455 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 GDF6Q6KF10 455 aaPredicted RBP14.11□□□□□ -0.15
USH1C-208ENST00000529563 LRRC8DQ7L1W4 858 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 HOMER1Q86YM7 354 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 PXMP2Q9NR77 195 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 COL20A1Q9P218 1284 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 PCDHA1Q9Y5I3 950 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 SCN10AQ9Y5Y9 1956 aa14.11□□□□□ -0.15
USH1C-208ENST00000529563 SCN5AQ14524 2016 aa14.1□□□□□ -0.15
USH1C-208ENST00000529563 PARNO95453 639 aaKnown RBP14.1□□□□□ -0.15
USH1C-208ENST00000529563 ZNF286BP0CG31 522 aa14.1□□□□□ -0.15
USH1C-208ENST00000529563 KIAA0753Q2KHM9 967 aa14.1□□□□□ -0.15
USH1C-208ENST00000529563 KCNV1Q6PIU1 500 aa14.1□□□□□ -0.15
USH1C-208ENST00000529563 RUFY2Q8WXA3 655 aa14.1□□□□□ -0.15
USH1C-208ENST00000529563 HDAC6Q9UBN7 1215 aa14.1□□□□□ -0.15
USH1C-208ENST00000529563 DDX41Q9UJV9 622 aaKnown RBP14.1□□□□□ -0.15
USH1C-208ENST00000529563 LAMA4Q16363 1823 aa14.1□□□□□ -0.15
USH1C-208ENST00000529563 ZBTB5O15062 677 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 CCND2P30279 289 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
USH1C-208ENST00000529563 SART3Q15020 963 aaKnown RBP14.09□□□□□ -0.15
USH1C-208ENST00000529563 CNKSR3Q6P9H4 555 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 RALYLQ86SE5 291 aaKnown RBP14.09□□□□□ -0.15
USH1C-208ENST00000529563 STAG2Q8N3U4 1231 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 PPTC7Q8NI37 304 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 VWCEQ96DN2 955 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 SPATA33Q96N06 139 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 MLXIPQ9HAP2 919 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 GTF2IRD1Q9UHL9 959 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 CHD9Q3L8U1 2897 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 MYH6P13533 1939 aa14.09□□□□□ -0.15
USH1C-208ENST00000529563 TANC1Q9C0D5 1861 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 SPTBN5Q9NRC6 3674 aaKnown RBP14.08□□□□□ -0.16
USH1C-208ENST00000529563 GCOM1H8Y6P7 765 aaPredicted RBP14.08□□□□□ -0.16
USH1C-208ENST00000529563 IFIT3O14879 490 aaKnown RBP14.08□□□□□ -0.16
USH1C-208ENST00000529563 POLR2MP0CAP2 368 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 CKBP12277 381 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 WDR5P61964 334 aaKnown RBP14.08□□□□□ -0.16
USH1C-208ENST00000529563 TFF2Q03403 129 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 TAP1Q03518 808 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 PTK7Q13308 1070 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 IKBKEQ14164 716 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 TTC22Q5TAA0 569 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 SESTD1Q86VW0 696 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 KAT2BQ92831 832 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 EMID1Q96A84 441 aaPredicted RBP14.08□□□□□ -0.16
USH1C-208ENST00000529563 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
USH1C-208ENST00000529563 MTCH2Q9Y6C9 303 aa14.08□□□□□ -0.16
USH1C-208ENST00000529563 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
USH1C-208ENST00000529563 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
USH1C-208ENST00000529563 EFCAB14O75071 495 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 GGPS1O95749 300 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 PDE4AP27815 886 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 HSD17B4P51659 736 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 WTAPQ15007 396 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 GNPTABQ3T906 1256 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 CASC1Q6TDU7 716 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 PIBF1Q8WXW3 757 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 PDCD2LQ9BRP1 358 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms