RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 ANTXR2P58335 489 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 GHRHRQ02643 423 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 RETREG2Q8NC44 543 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 MSRAQ9UJ68 235 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 NOD1Q9Y239 953 aa18.76■□□□□ 0.59
TRIM3-209ENST00000529529 GCOM1H8Y6P7 765 aaPredicted RBP18.75■□□□□ 0.59
TRIM3-209ENST00000529529 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 LAMC2Q13753 1193 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 RAB30Q15771 203 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 DEFB128Q7Z7B8 93 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 VSIG10LQ86VR7 867 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 DHX37Q8IY37 1157 aaKnown RBP18.75■□□□□ 0.59
TRIM3-209ENST00000529529 MB21D2Q8IYB1 491 aaPredicted RBP18.75■□□□□ 0.59
TRIM3-209ENST00000529529 PIBF1Q8WXW3 757 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 VWCEQ96DN2 955 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 PDCD2LQ9BRP1 358 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 SLC4A7Q9Y6M7 1214 aa18.75■□□□□ 0.59
TRIM3-209ENST00000529529 ZBBXA8MT70 800 aa18.74■□□□□ 0.59
TRIM3-209ENST00000529529 PGM5Q15124 567 aa18.74■□□□□ 0.59
TRIM3-209ENST00000529529 PTGISQ16647 500 aa18.74■□□□□ 0.59
TRIM3-209ENST00000529529 DGKDQ16760 1214 aa18.74■□□□□ 0.59
TRIM3-209ENST00000529529 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
TRIM3-209ENST00000529529 KAT2BQ92831 832 aa18.74■□□□□ 0.59
TRIM3-209ENST00000529529 ZFP91Q96JP5 570 aaPredicted RBP18.74■□□□□ 0.59
TRIM3-209ENST00000529529 BFSP2Q13515 415 aa18.73■□□□□ 0.59
TRIM3-209ENST00000529529 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
TRIM3-209ENST00000529529 EMID1Q96A84 441 aaPredicted RBP18.73■□□□□ 0.59
TRIM3-209ENST00000529529 LSG1Q9H089 658 aaKnown RBP18.73■□□□□ 0.59
TRIM3-209ENST00000529529 PITPNM1O00562 1244 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 PRC1O43663 620 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 SORBS3O60504 671 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 RGS20O76081 388 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 PFKMP08237 780 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 IQCF3P0C7M6 154 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 RFC2P35250 354 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 RABGGTBP53611 331 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 GDF6Q6KF10 455 aaPredicted RBP18.72■□□□□ 0.59
TRIM3-209ENST00000529529 KCNV1Q6PIU1 500 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 ZNF654Q8IZM8 581 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 IL31RAQ8NI17 732 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
TRIM3-209ENST00000529529 ESYT1Q9BSJ8 1104 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 ALG1Q9BT22 464 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 MYL10Q9BUA6 226 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 FTOQ9C0B1 505 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRIM3-209ENST00000529529 NKX2-4Q9H2Z4 354 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 PRDM12Q9H4Q4 367 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 SLC28A3Q9HAS3 691 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 LY9Q9HBG7 655 aa18.72■□□□□ 0.59
TRIM3-209ENST00000529529 A0A0C4DFX4 3053 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 PPFIA4O75335 1185 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 CCND2P30279 289 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 MCM5P33992 734 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 PSEN2P49810 448 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 MYSM1Q5VVJ2 828 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 C7orf31Q8N865 590 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 PPTC7Q8NI37 304 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 RRP36Q96EU6 259 aaKnown RBP18.71■□□□□ 0.59
TRIM3-209ENST00000529529 MAP3K14Q99558 947 aa18.71■□□□□ 0.59
TRIM3-209ENST00000529529 YBX2Q9Y2T7 364 aaKnown RBP18.71■□□□□ 0.59
TRIM3-209ENST00000529529 CCDC69A6NI79 296 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 SLC27A2O14975 620 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 DDAH1O94760 285 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 TGFB3P10600 412 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 ACTN1P12814 892 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 ATP2A2P16615 1042 aaKnown RBP18.7■□□□□ 0.58
TRIM3-209ENST00000529529 KIF5BP33176 963 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 SP2Q02086 613 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 CELF3Q5SZQ8 465 aaKnown RBP18.7■□□□□ 0.58
TRIM3-209ENST00000529529 SESTD1Q86VW0 696 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 SPATA33Q96N06 139 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 GAS2L1Q99501 681 aaPredicted RBP18.7■□□□□ 0.58
TRIM3-209ENST00000529529 MTA3Q9BTC8 594 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 HDAC6Q9UBN7 1215 aa18.7■□□□□ 0.58
TRIM3-209ENST00000529529 GGPS1O95749 300 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 ZNF286BP0CG31 522 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 MYOGP15173 224 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 SMARCA1P28370 1054 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 MFSD10Q14728 455 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 NECTIN1Q15223 517 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 KIAA0753Q2KHM9 967 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 CREB3L3Q68CJ9 461 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 CCDC155Q8N6L0 562 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.58
TRIM3-209ENST00000529529 TMEM87BQ96K49 555 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 LZTS2Q9BRK4 669 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 KATNAL1Q9BW62 490 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 SPZ1Q9BXG8 430 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 COL25A1Q9BXS0 654 aaPredicted RBP18.69■□□□□ 0.58
TRIM3-209ENST00000529529 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 GTF2IRD1Q9UHL9 959 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 SCN10AQ9Y5Y9 1956 aa18.69■□□□□ 0.58
TRIM3-209ENST00000529529 SH2B2O14492 632 aaPredicted RBP18.68■□□□□ 0.58
TRIM3-209ENST00000529529 GNAQP50148 359 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
TRIM3-209ENST00000529529 HSDL1Q3SXM5 330 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms