RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 ARHGAP1Q07960 439 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 PSRC1Q6PGN9 363 aaPredicted RBP16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 FCHSD1Q86WN1 690 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 AFG1LQ8WV93 481 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 LZTS2Q9BRK4 669 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 SPZ1Q9BXG8 430 aa16.08■□□□□ 0.16
CHRDL2-205ENST00000528471 MMP3P08254 477 aa16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 CCND2P30279 289 aa16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 NOC4LQ9BVI4 516 aaKnown RBP16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 TRMT13Q9NUP7 481 aaKnown RBP16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 STXBP5LQ9Y2K9 1186 aa16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 UMODL1Q5DID0 1318 aa16.07■□□□□ 0.16
CHRDL2-205ENST00000528471 ACRP10323 421 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 RXRAP19793 462 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 LIFRP42702 1097 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 CCL23P55773 120 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 PGM5Q15124 567 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 NFRKBQ6P4R8 1299 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 MTIF3Q9H2K0 278 aaKnown RBP16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 IL23AQ9NPF7 189 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 DDX41Q9UJV9 622 aaKnown RBP16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 NOD1Q9Y239 953 aa16.06■□□□□ 0.16
CHRDL2-205ENST00000528471 CDH23Q9H251 3354 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 CYP2C9P11712 490 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 SMARCA1P28370 1054 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 DGKDQ16760 1214 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 TMEM240Q5SV17 173 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 KCNV1Q6PIU1 500 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 ZNF365Q70YC5 407 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 PPP1R13LQ8WUF5 828 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 CUL5Q93034 780 aa16.05■□□□□ 0.16
CHRDL2-205ENST00000528471 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 PTPN11Q06124 597 aaPredicted RBP16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 LAMC2Q13753 1193 aa16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 COL9A3Q14050 684 aaPredicted RBP16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 C16orf59Q7L2K0 433 aa16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 SMARCC2Q8TAQ2 1214 aa16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 EMID1Q96A84 441 aaPredicted RBP16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 WNT8AQ9H1J5 351 aa16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 KAT6AQ92794 2004 aa16.04■□□□□ 0.16
CHRDL2-205ENST00000528471 NEFLP07196 543 aa16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 KRT32Q14532 448 aa16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 GNPTABQ3T906 1256 aa16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 RPUSD2Q8IZ73 545 aaKnown RBP16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 SRBD1Q8N5C6 995 aaKnown RBP16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 PPTC7Q8NI37 304 aa16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 SCLYQ96I15 445 aa16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 GUCD1Q96NT3 240 aa16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 KATNAL1Q9BW62 490 aa16.03■□□□□ 0.16
CHRDL2-205ENST00000528471 TMEM265A0A087WTH1 108 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 SORBS3O60504 671 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 RGS20O76081 388 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 GGPS1O95749 300 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 FGBP02675 491 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 ZNF286BP0CG31 522 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 DNAJB2P25686 324 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 FANCBQ8NB91 859 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 RETREG2Q8NC44 543 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
CHRDL2-205ENST00000528471 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.15
CHRDL2-205ENST00000528471 TET1Q8NFU7 2136 aa16.02■□□□□ 0.15
CHRDL2-205ENST00000528471 STAM2O75886 525 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 PFKMP08237 780 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 TGFB3P10600 412 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 UBA1P22314 1058 aaKnown RBP16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 BFSP2Q13515 415 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 PTGISQ16647 500 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 CELF3Q5SZQ8 465 aaKnown RBP16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 APOA5Q6Q788 366 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 TMTC3Q6ZXV5 915 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 DHX32Q7L7V1 743 aaKnown RBP16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 OTOP2Q7RTS6 562 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 C7orf31Q8N865 590 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 SLC17A8Q8NDX2 589 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 HERVK_113Q902F9 699 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 SPATA33Q96N06 139 aa16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 TTYH1Q9H313 450 aaPredicted RBP16.01■□□□□ 0.15
CHRDL2-205ENST00000528471 MLXIPQ9HAP2 919 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms