RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CD4P01730 458 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 MYL3P08590 195 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
CHD7-208ENST00000528280 PPIGQ13427 754 aaKnown RBP eCLIP11.09□□□□□ -0.63
CHD7-208ENST00000528280 XRRA1Q6P2D8 792 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 CCDC62Q6P9F0 684 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 SEPT14Q6ZU15 432 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 VSIG10LQ86VR7 867 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 FAM126BQ8IXS8 530 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 MYLIPQ8WY64 445 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
CHD7-208ENST00000528280 TBX21Q9UL17 535 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 LTBP2Q14767 1821 aa11.09□□□□□ -0.63
CHD7-208ENST00000528280 EIF5BO60841 1220 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 PPP1R11O60927 126 aaPredicted RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 MYCLP12524 364 aaPredicted RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 EIF2AK2P19525 551 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 CCND2P30279 289 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 FGD1P98174 961 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 PURAQ00577 322 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 EXOSC10Q01780 885 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 SHHQ15465 462 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 DGKDQ16760 1214 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 GNPTABQ3T906 1256 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 NFRKBQ6P4R8 1299 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 DHX37Q8IY37 1157 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 PDCD2LQ9BRP1 358 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 COL20A1Q9P218 1284 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 DDX41Q9UJV9 622 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 MRVI1Q9Y6F6 885 aa11.08□□□□□ -0.64
CHD7-208ENST00000528280 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
CHD7-208ENST00000528280 MYH6P13533 1939 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 PIK3CDO00329 1044 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 OPLAHO14841 1288 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 PPFIA4O75335 1185 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 PSMA5P28066 241 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 RCAN1P53805 252 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 SMAD3P84022 425 aaKnown RBP11.07□□□□□ -0.64
CHD7-208ENST00000528280 PGM5Q15124 567 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 LY6KQ17RY6 165 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 FCHSD1Q86WN1 690 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
CHD7-208ENST00000528280 SMARCC2Q8TAQ2 1214 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 KATNAL1Q9BW62 490 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 MTIF3Q9H2K0 278 aaKnown RBP11.07□□□□□ -0.64
CHD7-208ENST00000528280 PSTPIP2Q9H939 334 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 PPP4R2Q9NY27 417 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
CHD7-208ENST00000528280 GRIN2DO15399 1336 aa11.07□□□□□ -0.64
CHD7-208ENST00000528280 ZBTB43O43298 467 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 FOSL2P15408 326 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 HOXA13P31271 388 aaPredicted RBP11.06□□□□□ -0.64
CHD7-208ENST00000528280 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 GIMAP8Q8ND71 665 aaPredicted RBP11.06□□□□□ -0.64
CHD7-208ENST00000528280 PPTC7Q8NI37 304 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 AFG1LQ8WV93 481 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 PIBF1Q8WXW3 757 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 KCNB2Q92953 911 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 GLT8D2Q9H1C3 349 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 ALDH8A1Q9H2A2 487 aaPredicted RBP11.06□□□□□ -0.64
CHD7-208ENST00000528280 TTYH1Q9H313 450 aaPredicted RBP11.06□□□□□ -0.64
CHD7-208ENST00000528280 HIPK3Q9H422 1215 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 EHMT1Q9H9B1 1298 aa11.06□□□□□ -0.64
CHD7-208ENST00000528280 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.05□□□□□ -0.64
CHD7-208ENST00000528280 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.05□□□□□ -0.64
CHD7-208ENST00000528280 hCG_1984214I3L0E3 225 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 MAFGO15525 162 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 B4GALT4O60513 344 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 FGBP02675 491 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 PFKMP08237 780 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 ITGB8P26012 769 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 ICAM3P32942 547 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 HSPA4P34932 840 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 PSMC6P62333 389 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 ARHGAP1Q07960 439 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 BFSP2Q13515 415 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 NEDD9Q14511 834 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 SLC35G1Q2M3R5 365 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 FAM47CQ5HY64 1035 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
CHD7-208ENST00000528280 PSRC1Q6PGN9 363 aaPredicted RBP11.05□□□□□ -0.64
CHD7-208ENST00000528280 APOA5Q6Q788 366 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 TMTC3Q6ZXV5 915 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 NLRX1Q86UT6 975 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 SESTD1Q86VW0 696 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 ZNF713Q8N859 430 aaPredicted RBP11.05□□□□□ -0.64
CHD7-208ENST00000528280 COPS5Q92905 334 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 CDHR1Q96JP9 859 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 RNPC3Q96LT9 517 aaKnown RBP11.05□□□□□ -0.64
CHD7-208ENST00000528280 MYL10Q9BUA6 226 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms