RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 CCDC70Q6NSX1 233 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 LRRC47Q8N1G4 583 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 CCDC155Q8N6L0 562 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 TRIM58Q8NG06 486 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 HPS3Q969F9 1004 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 RBM17Q96I25 401 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 CAPZA3Q96KX2 299 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 CCDC42Q96M95 316 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 ALS2CR12Q96Q35 445 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 NAP1L4Q99733 375 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 IFIH1Q9BYX4 1025 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 NDST4Q9H3R1 872 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 SUGCTQ9HAC7 445 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 ZCCHC17Q9NP64 241 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 SLC39A2Q9NP94 309 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 RIC8AQ9NPQ8 531 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 PODXL2Q9NZ53 605 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 CWC15Q9P013 229 aaKnown RBP9.91□□□□□ -0.82
PKP3-202ENST00000524646 ADAM21Q9UKJ8 722 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 HPCAL4Q9UM19 191 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 SNX12Q9UMY4 172 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 PLAGL2Q9UPG8 496 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 HYOU1Q9Y4L1 999 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 MYH11P35749 1972 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 BRWD3Q6RI45 1802 aa9.91□□□□□ -0.82
PKP3-202ENST00000524646 ZC3H4Q9UPT8 1303 aaKnown RBP9.9□□□□□ -0.82
PKP3-202ENST00000524646 MACROD2A1Z1Q3 448 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 POTEMA6NI47 508 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 LRRIQ3A6PVS8 624 aaPredicted RBP9.9□□□□□ -0.82
PKP3-202ENST00000524646 EPHB6O15197 1021 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 PJA2O43164 708 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 AKR1B1P15121 316 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 TCP1P17987 556 aaKnown RBP9.9□□□□□ -0.82
PKP3-202ENST00000524646 C2orf54Q08AI8 447 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 ZNF543Q08ER8 600 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 COASYQ13057 564 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 PDIA5Q14554 519 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 ZSCAN26Q16670 478 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 CCDC96Q2M329 555 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 ZCWPW2Q504Y3 356 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 HYIQ5T013 277 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 TRAPPC3LQ5T215 181 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 PPP4R3AQ6IN85 833 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 DPP8Q6V1X1 898 aaPredicted RBP9.9□□□□□ -0.82
PKP3-202ENST00000524646 LEKR1Q6ZMV7 388 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 AEBP2Q6ZN18 517 aaPredicted RBP9.9□□□□□ -0.82
PKP3-202ENST00000524646 CCDC84Q86UT8 332 aaPredicted RBP9.9□□□□□ -0.82
PKP3-202ENST00000524646 C2CD5Q86YS7 1000 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 MMGT1Q8N4V1 131 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 BAP1Q92560 729 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 UBA5Q9GZZ9 404 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 VAT1LQ9HCJ6 419 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 MTMR4Q9NYA4 1195 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 ARHGAP20Q9P2F6 1191 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 SWAP70Q9UH65 585 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 JRKLQ9Y4A0 524 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 CAPN6Q9Y6Q1 641 aa9.9□□□□□ -0.82
PKP3-202ENST00000524646 RGPD3A6NKT7 1758 aaPredicted RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 RGPD4Q7Z3J3 1758 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 PNMA6FA0A0J9YX94 578 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 SSU72P8A0A1W2PR75 194 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 LRRC53A6NM62 1247 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 PDE2AO00408 941 aaPredicted RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 SRGAP2O75044 1071 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 N4BP1O75113 896 aaKnown RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 IVLP07476 585 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 PLEKP08567 350 aaPredicted RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 ACTN2P35609 894 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 EIF4A3P38919 411 aaKnown RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 CLK2P49760 499 aaKnown RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 GYS2P54840 703 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 CYP27A1Q02318 531 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 FAM26FQ5R3K3 315 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 DYMQ7RTS9 669 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 TMC4Q7Z404 712 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 MYOCDQ8IZQ8 938 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 TBC1D16Q8TBP0 767 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 AENQ8WTP8 325 aaKnown RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 CUL5Q93034 780 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 COA7Q96BR5 231 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 CEP63Q96MT8 703 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 C8orf37Q96NL8 207 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 TSPYL1Q9H0U9 437 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 DEF6Q9H4E7 631 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 MLXIPQ9HAP2 919 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 FAM207AQ9NSI2 230 aaPredicted RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 CEP72Q9P209 647 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 DDX25Q9UHL0 483 aaKnown RBP9.89□□□□□ -0.83
PKP3-202ENST00000524646 TSKSQ9UJT2 592 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 SUGT1Q9Y2Z0 365 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 PCDHA13Q9Y5I0 950 aa9.89□□□□□ -0.83
PKP3-202ENST00000524646 SCN9AQ15858 1988 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 RBAK-RBAKDNI3L0D1 243 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 TULP2O00295 520 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 NKRFO15226 690 aaKnown RBP eCLIP9.88□□□□□ -0.83
PKP3-202ENST00000524646 EDIL3O43854 480 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 AKR1B10O60218 316 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms