RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 RTP1P59025 263 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 ME3Q16798 604 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 TMEM63BQ5T3F8 832 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 MCTP2Q6DN12 878 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 USP17L6PQ6QN14 398 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 CHRDL2Q6WN34 429 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 FAM177A1Q8N128 213 aaPredicted RBP19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 SPC25Q9HBM1 224 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 SH3GLB2Q9NR46 395 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 GNEQ9Y223 722 aaKnown RBP19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 Q9Y3F1 56 aa19.05■□□□□ 0.64
CSGALNACT1-216ENST00000524213 STK36Q9NRP7 1315 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 A0A1W2PQ45 241 aaPredicted RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 A0A1W2PQY0 241 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 RBM47A0AV96 593 aaKnown RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 SPDYE3A6NKU9 549 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 NKRFO15226 690 aaKnown RBP eCLIP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 EIF3JO75822 258 aaKnown RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 STAM2O75886 525 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 C6orf222P0C671 652 aaPredicted RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 SMPD1P17405 629 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 CST5P28325 142 aaPredicted RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 GNA11P29992 359 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 CCND2P30279 289 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 PGM5Q15124 567 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 KCNA10Q16322 511 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 CCSAPQ6IQ19 270 aaPredicted RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 GTF3C6Q969F1 213 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 TSEN34Q9BSV6 310 aaKnown RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 C6orf50Q9HD87 102 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 SH2B1Q9NRF2 756 aaPredicted RBP19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 ATP11BQ9Y2G3 1177 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 LTBP2Q14767 1821 aa19.04■□□□□ 0.64
CSGALNACT1-216ENST00000524213 FRMPD4Q14CM0 1322 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 CTAGE5O15320 804 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 FOSP01100 380 aaPredicted RBP19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 ACLYP53396 1101 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 SNX17Q15036 470 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 TYW1BQ6NUM6 668 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 XRRA1Q6P2D8 792 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 TLK2Q86UE8 772 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 SCFD2Q8WU76 684 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 WASF1Q92558 559 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 ZMYND12Q9H0C1 365 aa19.03■□□□□ 0.64
CSGALNACT1-216ENST00000524213 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 XBP1P17861 261 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 MCM2P49736 904 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 BEX3Q00994 111 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 AP3B2Q13367 1082 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 TTLL4Q14679 1199 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 UBE2SQ16763 222 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 TRIM60Q495X7 471 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 HABP4Q5JVS0 413 aaKnown RBP19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 VSIG10LQ86VR7 867 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 BICD2Q8TD16 824 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 WDR11Q9BZH6 1224 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 PCDHA6Q9UN73 950 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 PCDHA8Q9Y5H6 950 aa19.02■□□□□ 0.64
CSGALNACT1-216ENST00000524213 MOXD2PA6NHM9 499 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 DYNC1LI2O43237 492 aaPredicted RBP19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 LARGE1O95461 756 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 ASGR1P07306 291 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 NKX3-2P78367 333 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 DUSP28Q4G0W2 176 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 GNASQ5JWF2 1037 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 KCNV1Q6PIU1 500 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 NECAB1Q8N987 351 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 PCSK9Q8NBP7 692 aaKnown RBP19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 AP5M1Q9H0R1 490 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 MYH7BA7E2Y1 1941 aa19.01■□□□□ 0.63
CSGALNACT1-216ENST00000524213 PPFIA3O75145 1194 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 NLRP5P59047 1200 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 GNPTABQ3T906 1256 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 C1orf53Q5VUE5 145 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 PCNX4Q63HM2 1172 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 SEPT14Q6ZU15 432 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 PRO3102Q9H379 93 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 STARD7Q9NQZ5 370 aa19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 ORC3Q9UBD5 711 aaPredicted RBP19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 RANBP2P49792 3224 aaKnown RBP19■□□□□ 0.63
CSGALNACT1-216ENST00000524213 TRIOBPQ9H2D6 2365 aa18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 ZEB2O60315 1214 aa18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 TXNP10599 105 aaKnown RBP18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 CLK2P49760 499 aaKnown RBP18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 FSCN1Q16658 493 aaKnown RBP18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 GALNT17Q6IS24 598 aa18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 LLPHQ9BRT6 129 aaKnown RBP18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 VPS54Q9P1Q0 977 aa18.99■□□□□ 0.63
CSGALNACT1-216ENST00000524213 CTDNEP1O95476 244 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 TGFB3P10600 412 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 MAGEA10P43363 369 aaPredicted RBP18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 TLE2Q04725 743 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 NLRX1Q86UT6 975 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 NSUN7Q8NE18 718 aaKnown RBP18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 IL31RAQ8NI17 732 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 GLT1D1Q96MS3 346 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 GDF15Q99988 308 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 ANO3Q9BYT9 981 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 MRVI1Q9Y6F6 885 aa18.98■□□□□ 0.63
CSGALNACT1-216ENST00000524213 ARIH2O95376 493 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms