RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 POLR2AP24928 1970 aaKnown RBP8.84□□□□□ -0.99
SPIDR-223ENST00000524033 PSME4Q14997 1843 aa8.84□□□□□ -0.99
SPIDR-223ENST00000524033 MYH1P12882 1939 aa8.84□□□□□ -1
SPIDR-223ENST00000524033 MAST2Q6P0Q8 1798 aa8.84□□□□□ -1
SPIDR-223ENST00000524033 B4E1Z4 1266 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 MAP2K7O14733 419 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 URI1O94763 535 aaPredicted RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 SEC31AO94979 1220 aaKnown RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 MMP1P03956 469 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 ERCC5P28715 1186 aaPredicted RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 CASQ1P31415 396 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 PPATQ06203 517 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 TRDNQ13061 729 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 PPIL2Q13356 520 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 CUL4BQ13620 913 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 RASGRF1Q13972 1273 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 NR1I3Q14994 352 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 TAF1CQ15572 869 aaPredicted RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 CDKAL1Q5VV42 579 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 JAKMIP3Q5VZ66 844 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 SPECC1LQ69YQ0 1117 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 ISM2Q6H9L7 571 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 TOGARAM2Q6ZUX3 1019 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 DZIP1Q86YF9 867 aaKnown RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 NOSTRINQ8IVI9 506 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 ZFPM1Q8IX07 1006 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 MSANTD4Q8NCY6 345 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 PNMA1Q8ND90 353 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 CNNM3Q8NE01 707 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 STAG1Q8WVM7 1258 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 PHKBQ93100 1093 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 STRBPQ96SI9 672 aaKnown RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 FOXP1Q9H334 677 aaPredicted RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 MRPL44Q9H9J2 332 aaKnown RBP8.83□□□□□ -1
SPIDR-223ENST00000524033 PSD3Q9NYI0 1048 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 DACH1Q9UI36 760 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 ZNF112Q9UJU3 913 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 NFE2L3Q9Y4A8 694 aa8.83□□□□□ -1
SPIDR-223ENST00000524033 ITIH6Q6UXX5 1313 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 ZNF532Q9HCE3 1301 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 BTBD19C9JJ37 291 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 TLR2O60603 784 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 UQCRFS1P1P0C7P4 283 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 INPP5BP32019 993 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 USP5P45974 858 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 GRIN1Q05586 938 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 SSRP1Q08945 709 aaKnown RBP8.82□□□□□ -1
SPIDR-223ENST00000524033 BRD3Q15059 726 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 ZSCAN29Q8IWY8 852 aaPredicted RBP8.82□□□□□ -1
SPIDR-223ENST00000524033 IQUBQ8NA54 791 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 WASF1Q92558 559 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
SPIDR-223ENST00000524033 SHISA4Q96DD7 197 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 NAA15Q9BXJ9 866 aaKnown RBP8.82□□□□□ -1
SPIDR-223ENST00000524033 IDI2Q9BXS1 227 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 FUT8Q9BYC5 575 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 IL21Q9HBE4 155 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 ZCCHC17Q9NP64 241 aaKnown RBP8.82□□□□□ -1
SPIDR-223ENST00000524033 AATFQ9NY61 560 aaKnown RBP eCLIP8.82□□□□□ -1
SPIDR-223ENST00000524033 PCDH10Q9P2E7 1040 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 SERTAD1Q9UHV2 236 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 RAB21Q9UL25 225 aa8.82□□□□□ -1
SPIDR-223ENST00000524033 SRPRBQ9Y5M8 271 aaKnown RBP8.82□□□□□ -1
SPIDR-223ENST00000524033 PDS5AQ29RF7 1337 aaKnown RBP8.81□□□□□ -1
SPIDR-223ENST00000524033 CASP8AP2Q9UKL3 1982 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 CCDC151A5D8V7 595 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 ENTPD3O75355 529 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 RXRAP19793 462 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 OAS2P29728 719 aaKnown RBP8.81□□□□□ -1
SPIDR-223ENST00000524033 CTHP32929 405 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 MECOMQ03112 1051 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 TUBB2AQ13885 445 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 KIF22Q14807 665 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 RILPL1Q5EBL4 403 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 TMEM67Q5HYA8 995 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 KANK3Q6NY19 840 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 MICU3Q86XE3 530 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 DIS3L2Q8IYB7 885 aaKnown RBP8.81□□□□□ -1
SPIDR-223ENST00000524033 SPATA5Q8NB90 893 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 HNRNPLLQ8WVV9 542 aaKnown RBP8.81□□□□□ -1
SPIDR-223ENST00000524033 GOLGA1Q92805 767 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 SMARCE1Q969G3 411 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 DHX58Q96C10 678 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 TUBB2BQ9BVA1 445 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 TMEM51Q9NW97 253 aa8.81□□□□□ -1
SPIDR-223ENST00000524033 ADD3Q9UEY8 706 aaKnown RBP8.81□□□□□ -1
SPIDR-223ENST00000524033 HOOK1Q9UJC3 728 aaKnown RBP8.81□□□□□ -1
SPIDR-223ENST00000524033 ZNF646O15015 1829 aaPredicted RBP8.81□□□□□ -1
SPIDR-223ENST00000524033 BAZ2AQ9UIF9 1905 aaKnown RBP8.8□□□□□ -1
SPIDR-223ENST00000524033 A0A087X0B3 334 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 GPR75-ASB3A0A0A6YYF3 556 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 GSG1L2A8MUP6 293 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 PHF20L1A8MW92 1017 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 BTBD18B2RXH4 712 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 PATL2C9JE40 543 aaKnown RBP8.8□□□□□ -1
SPIDR-223ENST00000524033 AKR1B15C9JRZ8 316 aaPredicted RBP8.8□□□□□ -1
SPIDR-223ENST00000524033 H3BQF6 201 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 PDHXO00330 501 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 CXCL11O14625 94 aa8.8□□□□□ -1
SPIDR-223ENST00000524033 TLL1O43897 1013 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms