RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 LZTS2Q9BRK4 669 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 PBX4Q9BYU1 374 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 COL20A1Q9P218 1284 aa10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 SEC63Q9UGP8 760 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 RBM8AQ9Y5S9 174 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-240ENST00000523912 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 ARIH2O95376 493 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 CYP2C9P11712 490 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 MYCLP12524 364 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 CCND2P30279 289 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 MCM5P33992 734 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 GNAQP50148 359 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 LY6KQ17RY6 165 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 GNPTABQ3T906 1256 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 CCDC62Q6P9F0 684 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 CHST3Q7LGC8 479 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 OTOP2Q7RTS6 562 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 TMTC2Q8N394 836 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 USP38Q8NB14 1042 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 PPTC7Q8NI37 304 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 CAGE1Q8TC20 777 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 MAP4K1Q92918 833 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 CUL5Q93034 780 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 EMID1Q96A84 441 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 MTMR8Q96EF0 704 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 RRP36Q96EU6 259 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 ASB2Q96Q27 587 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 PIGSQ96S52 555 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 WNT8AQ9H1J5 351 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 THEGQ9P2T0 379 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 UMODL1Q5DID0 1318 aa10.26□□□□□ -0.77
CTNNA1-240ENST00000523912 LCTP09848 1927 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 PRC1O43663 620 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 CALM1P0DP23 149 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 CALM2P0DP24 149 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 CALM3P0DP25 149 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 HOXA13P31271 388 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 MRPS5P82675 430 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 ARHGAP1Q07960 439 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 TROAPQ12815 778 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 PTGISQ16647 500 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 RNF20Q5VTR2 975 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 FCHSD1Q86WN1 690 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 DHX37Q8IY37 1157 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 MB21D2Q8IYB1 491 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 C7orf31Q8N865 590 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 SCLYQ96I15 445 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 PDCD2LQ9BRP1 358 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 RIOX1Q9H6W3 641 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 DDX41Q9UJV9 622 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-240ENST00000523912 PPP1R11O60927 126 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 STAM2O75886 525 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 PARNO95453 639 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 TGFB3P10600 412 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 ATP2A2P16615 1042 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 PGM5Q15124 567 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 STOX1Q6ZVD7 989 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 CENPQQ7L2Z9 268 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 DEFB128Q7Z7B8 93 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 VSIG10LQ86VR7 867 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 SESTD1Q86VW0 696 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 ZNF654Q8IZM8 581 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 AFAP1L1Q8TED9 768 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 SPATA33Q96N06 139 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 ESYT1Q9BSJ8 1104 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 SPZ1Q9BXG8 430 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 FTOQ9C0B1 505 aaKnown RBP eCLIP10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 PRDM12Q9H4Q4 367 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 SLC28A3Q9HAS3 691 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 LY9Q9HBG7 655 aa10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 CXXC1Q9P0U4 656 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-240ENST00000523912 SCN10AQ9Y5Y9 1956 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 GRXCR1A8MXD5 290 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 NOP56O00567 594 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 SH2B2O14492 632 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 OPLAHO14841 1288 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 GGPS1O95749 300 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 F2P00734 622 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 ZNF286BP0CG31 522 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 POU3F3P20264 500 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 COL9A1P20849 921 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 UBA1P22314 1058 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 SMARCA1P28370 1054 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 PBX2P40425 430 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 KCNJ6P48051 423 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 PSEN2P49810 448 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 ANTXR2P58335 489 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 MFSD10Q14728 455 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 BMP2KLQ5H9B9 411 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 CELF3Q5SZQ8 465 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 PPP2R2DQ66LE6 453 aa10.23□□□□□ -0.77
CTNNA1-240ENST00000523912 XRRA1Q6P2D8 792 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms