RNA–Protein interactions for RNA: ENST00000523402.5

SORBS3-217, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 3

Gene SORBS3, Length 889 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-217ENST00000523402 HOMER1Q86YM7 354 aa18.19■□□□□ 0.5
SORBS3-217ENST00000523402 PPTC7Q8NI37 304 aa18.19■□□□□ 0.5
SORBS3-217ENST00000523402 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
SORBS3-217ENST00000523402 PIGSQ96S52 555 aa18.19■□□□□ 0.5
SORBS3-217ENST00000523402 PBX4Q9BYU1 374 aa18.19■□□□□ 0.5
SORBS3-217ENST00000523402 LY9Q9HBG7 655 aa18.19■□□□□ 0.5
SORBS3-217ENST00000523402 DDX41Q9UJV9 622 aaKnown RBP18.19■□□□□ 0.5
SORBS3-217ENST00000523402 CYP2C9P11712 490 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 HOXD8P13378 290 aaPredicted RBP18.18■□□□□ 0.5
SORBS3-217ENST00000523402 FOSL2P15408 326 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
SORBS3-217ENST00000523402 SMARCA1P28370 1054 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 KIF5BP33176 963 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 LAMC2Q13753 1193 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 DGKDQ16760 1214 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 MAFAQ8NHW3 353 aaPredicted RBP18.18■□□□□ 0.5
SORBS3-217ENST00000523402 MYLIPQ8WY64 445 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 VWCEQ96DN2 955 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 SPZ1Q9BXG8 430 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 LSG1Q9H089 658 aaKnown RBP18.18■□□□□ 0.5
SORBS3-217ENST00000523402 ZNF576Q9H609 170 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 MRVI1Q9Y6F6 885 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 EYSQ5T1H1 3165 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 FRMPD4Q14CM0 1322 aa18.18■□□□□ 0.5
SORBS3-217ENST00000523402 GCOM1H8Y6P7 765 aaPredicted RBP18.17■□□□□ 0.5
SORBS3-217ENST00000523402 POLR2MP0CAP2 368 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 BFSP2Q13515 415 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 PGM5Q15124 567 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 BMP2KLQ5H9B9 411 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 CASC1Q6TDU7 716 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 VSIG10LQ86VR7 867 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.17■□□□□ 0.5
SORBS3-217ENST00000523402 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 TMTC2Q8N394 836 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 KAT2BQ92831 832 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 KATNAL1Q9BW62 490 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 CXXC1Q9P0U4 656 aaPredicted RBP18.17■□□□□ 0.5
SORBS3-217ENST00000523402 MYH6P13533 1939 aa18.17■□□□□ 0.5
SORBS3-217ENST00000523402 RGS20O76081 388 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 F2P00734 622 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 TGFB3P10600 412 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 CCND2P30279 289 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 HOXA13P31271 388 aaPredicted RBP18.16■□□□□ 0.5
SORBS3-217ENST00000523402 MCM5P33992 734 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 GRIN2CQ14957 1233 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 OTOP2Q7RTS6 562 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
SORBS3-217ENST00000523402 CAGE1Q8TC20 777 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 SCLYQ96I15 445 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 TMEM87BQ96K49 555 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 LZTS2Q9BRK4 669 aa18.16■□□□□ 0.5
SORBS3-217ENST00000523402 KIAA1217Q5T5P2 1943 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 GRXCR1A8MXD5 290 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 DLL1O00548 723 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 PRC1O43663 620 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 STAM2O75886 525 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 PBX2P40425 430 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 GNAQP50148 359 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 RBL2Q08999 1139 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 DHX37Q8IY37 1157 aaKnown RBP18.15■□□□□ 0.5
SORBS3-217ENST00000523402 CCDC155Q8N6L0 562 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 RETREG2Q8NC44 543 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 MSRAQ9UJ68 235 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 NOD1Q9Y239 953 aa18.15■□□□□ 0.5
SORBS3-217ENST00000523402 CUL9Q8IWT3 2517 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 SH2B2O14492 632 aaPredicted RBP18.14■□□□□ 0.49
SORBS3-217ENST00000523402 SLC27A2O14975 620 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 MYCLP12524 364 aaPredicted RBP18.14■□□□□ 0.49
SORBS3-217ENST00000523402 LIFRP42702 1097 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 NECTIN1Q15223 517 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 PTGISQ16647 500 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 CELF3Q5SZQ8 465 aaKnown RBP18.14■□□□□ 0.49
SORBS3-217ENST00000523402 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 IL31RAQ8NI17 732 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 AFAP1L1Q8TED9 768 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
SORBS3-217ENST00000523402 CTAGE1Q96RT6 745 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 GTF2IRD1Q9UHL9 959 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 SLC4A7Q9Y6M7 1214 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 TANC1Q9C0D5 1861 aa18.14■□□□□ 0.49
SORBS3-217ENST00000523402 HAS3O00219 553 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 PPFIA4O75335 1185 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 IQCF3P0C7M6 154 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 CALM1P0DP23 149 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 CALM2P0DP24 149 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 CALM3P0DP25 149 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 ACTN1P12814 892 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 GNPTABQ3T906 1256 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 CREB3L3Q68CJ9 461 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 GDF6Q6KF10 455 aaPredicted RBP18.13■□□□□ 0.49
SORBS3-217ENST00000523402 INPP4AQ96PE3 977 aaPredicted RBP18.13■□□□□ 0.49
SORBS3-217ENST00000523402 PCDHA11Q9Y5I1 949 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 CHD9Q3L8U1 2897 aa18.13■□□□□ 0.49
SORBS3-217ENST00000523402 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
SORBS3-217ENST00000523402 PIK3CDO00329 1044 aa18.12■□□□□ 0.49
SORBS3-217ENST00000523402 PARNO95453 639 aaKnown RBP18.12■□□□□ 0.49
SORBS3-217ENST00000523402 ATP2A2P16615 1042 aaKnown RBP18.12■□□□□ 0.49
SORBS3-217ENST00000523402 UBA1P22314 1058 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms