RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 RBM8AQ9Y5S9 174 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 MRVI1Q9Y6F6 885 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 UNC80Q8N2C7 3258 aa11.89□□□□□ -0.51
CTNNA1-235ENST00000522730 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 CCDC62Q6P9F0 684 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 DHX37Q8IY37 1157 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 MAFAQ8NHW3 353 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 PPM1EQ8WY54 764 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 MYL10Q9BUA6 226 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 FTOQ9C0B1 505 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 ZNF576Q9H609 170 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
CTNNA1-235ENST00000522730 EYSQ5T1H1 3165 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 GCOM1H8Y6P7 765 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 OPLAHO14841 1288 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 POLR2MP0CAP2 368 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 CASTP20810 708 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 RABGGTBP53611 331 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 ARHGAP1Q07960 439 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 HERVK_113Q902F9 699 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 PBX4Q9BYU1 374 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 DDX41Q9UJV9 622 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 SLC4A7Q9Y6M7 1214 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 LCTP09848 1927 aa11.87□□□□□ -0.51
CTNNA1-235ENST00000522730 CHD9Q3L8U1 2897 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 PNMA6FA0A0J9YX94 578 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 PRC1O43663 620 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 MMP3P08254 477 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 HSD17B4P51659 736 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 ANTXR2P58335 489 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 PTGISQ16647 500 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 NFRKBQ6P4R8 1299 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 MTMR8Q96EF0 704 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 PDCD2LQ9BRP1 358 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 NKX2-4Q9H2Z4 354 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 PRDM12Q9H4Q4 367 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 RIOX1Q9H6W3 641 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 ANO2Q9NQ90 1003 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 BAZ2BQ9UIF8 2168 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
CTNNA1-235ENST00000522730 CCDC69A6NI79 296 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 CYTH3O43739 400 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 MYOGP15173 224 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 RXRAP19793 462 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 CCND2P30279 289 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 TROAPQ12815 778 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 TRAF1Q13077 416 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 LAMC2Q13753 1193 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 DGKDQ16760 1214 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 GDF6Q6KF10 455 aaPredicted RBP11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 C7orf31Q8N865 590 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 IL31RAQ8NI17 732 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 CTCFLQ8NI51 663 aaPredicted RBP11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 RRP36Q96EU6 259 aaKnown RBP11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 ESYT1Q9BSJ8 1104 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 LRRC2Q9BYS8 371 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 MAF1Q9H063 256 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 LRRC37A2A6NM11 1700 aa11.85□□□□□ -0.51
CTNNA1-235ENST00000522730 SLC27A2O14975 620 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 GGPS1O95749 300 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 IQCF3P0C7M6 154 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 ZNF286BP0CG31 522 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 IGFBP4P22692 258 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 MCM5P33992 734 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 PSEN2P49810 448 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 BFSP2Q13515 415 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 PGM5Q15124 567 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 RAB30Q15771 203 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 CCDC85BQ15834 202 aaPredicted RBP11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 KAT2BQ92831 832 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 GAS2L1Q99501 681 aaPredicted RBP11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 LSG1Q9H089 658 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 MLXIPQ9HAP2 919 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 HDAC6Q9UBN7 1215 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 MYO9BQ13459 2157 aa11.84□□□□□ -0.51
CTNNA1-235ENST00000522730 TMEM265A0A087WTH1 108 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 hCG_1642624A0A1W2PR95 340 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms