RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PLD2O14939 933 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 NUAK1O60285 661 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 THBDP07204 575 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 ZSCAN22P10073 491 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 CORO7P57737 925 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 NR1I3Q14994 352 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 PLEKHN1Q494U1 663 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 FNDC3BQ53EP0 1204 aaKnown RBP6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 MBLAC2Q68D91 279 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 CIAPIN1Q6FI81 312 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 PAQR3Q6TCH7 311 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 GSTCDQ8NEC7 633 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 MZB1Q8WU39 189 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 DHRS4Q9BTZ2 278 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 MRPL4Q9BYD3 311 aaKnown RBP6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 NKX2-4Q9H2Z4 354 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 LRP2BPQ9P2M1 347 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 KCTD3Q9Y597 815 aa6.75□□□□□ -1.33
HMGB1P1-201ENST00000522557 TRAV20A0A0B4J274 112 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 F8W031 263 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 ARNTLO00327 626 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 CYBBP04839 570 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 SCG5P05408 212 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 MAPKAPK2P49137 400 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 TMEM62Q0P6H9 643 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 HSP90AA2PQ14568 343 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 SF1Q15637 639 aaKnown RBP6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 INF2Q27J81 1249 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 OLFML2BQ68BL8 750 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 ZC3H14Q6PJT7 736 aaKnown RBP6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 IGDCC3Q8IVU1 814 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 LZTR1Q8N653 840 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 FRS2Q8WU20 508 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 MFSD3Q96ES6 412 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 SIGLEC10Q96LC7 697 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 MTA3Q9BTC8 594 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 EPB41L4AQ9HCS5 686 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 PCDHA5Q9Y5H7 936 aa6.74□□□□□ -1.33
HMGB1P1-201ENST00000522557 GSG1L2A8MUP6 293 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 SRGAP3O43295 1099 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 GLI4P10075 376 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 PI3P19957 117 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 STAT3P40763 770 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 PRR5P85299 388 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 ZNF200P98182 395 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 PABPC4Q13310 644 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 RNF180Q86T96 592 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 TMEFF1Q8IYR6 380 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 ZCRB1Q8TBF4 217 aaKnown RBP6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 STAG1Q8WVM7 1258 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 DPF3Q92784 378 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 MMP19Q99542 508 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 TRIM39Q9HCM9 518 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 TMEFF2Q9UIK5 374 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 IRAK3Q9Y616 596 aa6.73□□□□□ -1.33
HMGB1P1-201ENST00000522557 TRBV23OR9-2A0A075B6M9 112 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 TRBV23-1A0A0A0MS06 115 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 AGRPO00253 132 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 IRS4O14654 1257 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 DLX3O60479 287 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 NPHS1O60500 1241 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 PABPC1P11940 636 aaKnown RBP6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 ECI1P42126 302 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 GFRA1P56159 465 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 TESK1Q15569 626 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 PRSS53Q2L4Q9 553 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 FBLN7Q53RD9 439 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 ZNF385BQ569K4 471 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 SLC35F1Q5T1Q4 408 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 AMIGO3Q86WK7 504 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 SIAH1Q8IUQ4 282 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 SCUBE1Q8IWY4 988 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 NPLOC4Q8TAT6 608 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 FAM126AQ9BYI3 521 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 SLKQ9H2G2 1235 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 BCAS3Q9H6U6 928 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 IRS2Q9Y4H2 1338 aa6.72□□□□□ -1.33
HMGB1P1-201ENST00000522557 BUB1BO60566 1050 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 FUCA1P04066 466 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 HOXC12P31275 282 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 SUMO1P63165 101 aaKnown RBP6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 MAP4K2Q12851 820 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 NTRK3Q16288 839 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 NIM1KQ8IY84 436 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 KREMEN2Q8NCW0 462 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 PLEKHO2Q8TD55 490 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 INTS7Q9NVH2 962 aaKnown RBP6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 DBR1Q9UK59 544 aaKnown RBP6.71□□□□□ -1.34
HMGB1P1-201ENST00000522557 ADAMTS20P59510 1910 aa6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 hCG_2014768A0A024R1R8 64 aa6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 SNRPB2P08579 225 aaKnown RBP6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 POU3F2P20265 443 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 DENND5AQ6IQ26 1287 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms