RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 MTIF3Q9H2K0 278 aaKnown RBP12.44□□□□□ -0.42
PVT1-209ENST00000520913 IL23AQ9NPF7 189 aa12.44□□□□□ -0.42
PVT1-209ENST00000520913 MRVI1Q9Y6F6 885 aa12.44□□□□□ -0.42
PVT1-209ENST00000520913 KAT6AQ92794 2004 aa12.44□□□□□ -0.42
PVT1-209ENST00000520913 FRMPD4Q14CM0 1322 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 A0A0C4DFX4 3053 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
PVT1-209ENST00000520913 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
PVT1-209ENST00000520913 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 CALM1P0DP23 149 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 CALM2P0DP24 149 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 CALM3P0DP25 149 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
PVT1-209ENST00000520913 PGM5Q15124 567 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 NBPF20Q3BBV1 942 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 CREB3L3Q68CJ9 461 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 TMTC2Q8N394 836 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 AFG1LQ8WV93 481 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 EMID1Q96A84 441 aaPredicted RBP12.43□□□□□ -0.42
PVT1-209ENST00000520913 MYL10Q9BUA6 226 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 WNT8AQ9H1J5 351 aa12.43□□□□□ -0.42
PVT1-209ENST00000520913 SEC63Q9UGP8 760 aaKnown RBP12.43□□□□□ -0.42
PVT1-209ENST00000520913 MICAL3Q7RTP6 2002 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.42□□□□□ -0.42
PVT1-209ENST00000520913 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.42□□□□□ -0.42
PVT1-209ENST00000520913 ACRP10323 421 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 MYCLP12524 364 aaPredicted RBP12.42□□□□□ -0.42
PVT1-209ENST00000520913 DNAJB2P25686 324 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 CCND2P30279 289 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 LIFRP42702 1097 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 GNAQP50148 359 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 CCL23P55773 120 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 RASIP1Q5U651 963 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 KCNV1Q6PIU1 500 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 RRP36Q96EU6 259 aaKnown RBP12.42□□□□□ -0.42
PVT1-209ENST00000520913 LZTS2Q9BRK4 669 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 KATNAL1Q9BW62 490 aa12.42□□□□□ -0.42
PVT1-209ENST00000520913 TRMT13Q9NUP7 481 aaKnown RBP12.42□□□□□ -0.42
PVT1-209ENST00000520913 DDX41Q9UJV9 622 aaKnown RBP12.42□□□□□ -0.42
PVT1-209ENST00000520913 COL4A4P53420 1690 aaPredicted RBP12.42□□□□□ -0.42
PVT1-209ENST00000520913 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 REV3LO60673 3130 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 CDC45O75419 566 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 PFKMP08237 780 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 CYP2C9P11712 490 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 CASTP20810 708 aaKnown RBP12.41□□□□□ -0.42
PVT1-209ENST00000520913 SMARCA1P28370 1054 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 DGKDQ16760 1214 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 C16orf59Q7L2K0 433 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 FCHSD1Q86WN1 690 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
PVT1-209ENST00000520913 CCDC155Q8N6L0 562 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 SLC17A8Q8NDX2 589 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 IL31RAQ8NI17 732 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 PPTC7Q8NI37 304 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 HERVK_113Q902F9 699 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 TTYH1Q9H313 450 aaPredicted RBP12.41□□□□□ -0.42
PVT1-209ENST00000520913 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 SIP14410 1827 aa12.41□□□□□ -0.42
PVT1-209ENST00000520913 STAM2O75886 525 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 RGS20O76081 388 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 PLEKHA8P1O95397 391 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 F2P00734 622 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 FGBP02675 491 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 RFC2P35250 354 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 CHMP4BP1P59074 171 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 LAMC2Q13753 1193 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 GNPTABQ3T906 1256 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 VSIG10LQ86VR7 867 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 SESTD1Q86VW0 696 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 RPUSD2Q8IZ73 545 aaKnown RBP12.4□□□□□ -0.42
PVT1-209ENST00000520913 CUL5Q93034 780 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 SCLYQ96I15 445 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 SLC12A7Q9Y666 1083 aa12.4□□□□□ -0.42
PVT1-209ENST00000520913 GGPS1O95749 300 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 TGFB3P10600 412 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 RXRAP19793 462 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 UBA1P22314 1058 aaKnown RBP12.39□□□□□ -0.43
PVT1-209ENST00000520913 BFSP2Q13515 415 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 COL9A3Q14050 684 aaPredicted RBP12.39□□□□□ -0.43
PVT1-209ENST00000520913 RAB30Q15771 203 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 SGMS1Q86VZ5 419 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 MICU3Q86XE3 530 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 SMARCC2Q8TAQ2 1214 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 CAGE1Q8TC20 777 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 TIFAQ96CG3 184 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 CDX2Q99626 313 aaPredicted RBP12.39□□□□□ -0.43
PVT1-209ENST00000520913 LRRC2Q9BYS8 371 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
PVT1-209ENST00000520913 PIK3CDO00329 1044 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms