RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
SPARC-202ENST00000520687 TDRD3Q9H7E2 651 aaKnown RBP11.15□□□□□ -0.62
SPARC-202ENST00000520687 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
SPARC-202ENST00000520687 MAGEC2Q9UBF1 373 aaPredicted RBP11.15□□□□□ -0.62
SPARC-202ENST00000520687 DDX25Q9UHL0 483 aaKnown RBP11.15□□□□□ -0.62
SPARC-202ENST00000520687 ZNRF3Q9ULT6 936 aa11.15□□□□□ -0.62
SPARC-202ENST00000520687 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 YDJCA8MPS7 323 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 TMEM232C9JQI7 657 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 N4BP3O15049 544 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 CTIFO43310 598 aaKnown RBP11.14□□□□□ -0.63
SPARC-202ENST00000520687 MARCH6O60337 910 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 PPP1R11O60927 126 aaPredicted RBP11.14□□□□□ -0.63
SPARC-202ENST00000520687 CCNE1P24864 410 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 CDC37Q16543 378 aaPredicted RBP11.14□□□□□ -0.63
SPARC-202ENST00000520687 SYDE2Q5VT97 1194 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 TTBK2Q6IQ55 1244 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 KCTD1Q719H9 257 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 FBXO11Q86XK2 927 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 SIAH1Q8IUQ4 282 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 CHURC1Q8WUH1 139 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 PPP1R13BQ96KQ4 1090 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
SPARC-202ENST00000520687 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
SPARC-202ENST00000520687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPARC-202ENST00000520687 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 TMEM260Q9NX78 707 aa11.14□□□□□ -0.63
SPARC-202ENST00000520687 ABCB11O95342 1321 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 KCNJ18B7U540 433 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 PIK3CDO00329 1044 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 KIF20AO95235 890 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 NDUFB10O96000 172 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 FECHP22830 423 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 CDC25AP30304 524 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 COPB1P53618 953 aaKnown RBP11.13□□□□□ -0.63
SPARC-202ENST00000520687 STX17P56962 302 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 KCNJ12Q14500 433 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 TMEM119Q4V9L6 283 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 UNC13DQ70J99 1090 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 RASGRP2Q7LDG7 609 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 NIM1KQ8IY84 436 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 TC2NQ8N9U0 490 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 RETREG2Q8NC44 543 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 STAMQ92783 540 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 FAM20AQ96MK3 541 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 NUP58Q9BVL2 599 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 ZNF70Q9UC06 446 aaPredicted RBP11.13□□□□□ -0.63
SPARC-202ENST00000520687 PCDHA12Q9UN75 941 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 CUL9Q8IWT3 2517 aa11.13□□□□□ -0.63
SPARC-202ENST00000520687 PHLPP2Q6ZVD8 1323 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 PP2D1A8MPX8 630 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
SPARC-202ENST00000520687 CASP1P29466 404 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 CIITAP33076 1130 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 SLC16A2P36021 539 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 CACNB3P54284 484 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 ETF1P62495 437 aaKnown RBP11.12□□□□□ -0.63
SPARC-202ENST00000520687 ASIC1P78348 528 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 PDE4DQ08499 809 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 GRB10Q13322 594 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 KRT31Q15323 416 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 Q4G0T1 1027 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 TMTC1Q8IUR5 882 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 ERMNQ8TAM6 284 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 LARP4BQ92615 738 aaKnown RBP11.12□□□□□ -0.63
SPARC-202ENST00000520687 RAD54LQ92698 747 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 P2RX5Q93086 422 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 SRRTQ9BXP5 876 aaKnown RBP11.12□□□□□ -0.63
SPARC-202ENST00000520687 EHMT1Q9H9B1 1298 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 TMX2Q9Y320 296 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
SPARC-202ENST00000520687 LGALS16A8MUM7 142 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TDP2O95551 362 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 GH2P01242 217 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 CYP3A4P08684 503 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 DNM2P50570 870 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TNIP1Q15025 636 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 HAUS3Q68CZ6 603 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TTI2Q6NXR4 508 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TMEM139Q8IV31 216 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 SMYD4Q8IYR2 804 aaPredicted RBP11.11□□□□□ -0.63
SPARC-202ENST00000520687 GUF1Q8N442 669 aaKnown RBP11.11□□□□□ -0.63
SPARC-202ENST00000520687 SNX29Q8TEQ0 813 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 PKNOX2Q96KN3 472 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 TRMT1Q9NXH9 659 aaKnown RBP11.11□□□□□ -0.63
SPARC-202ENST00000520687 RABGAP1Q9Y3P9 1069 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 BAZ2BQ9UIF8 2168 aaKnown RBP11.11□□□□□ -0.63
SPARC-202ENST00000520687 SPDYE3A6NKU9 549 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 PSMD14O00487 310 aa11.11□□□□□ -0.63
SPARC-202ENST00000520687 SLC37A4O43826 429 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms