RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 MCF2L2Q86YR7 1114 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 TXNRD2Q9NNW7 524 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
CLN8-204ENST00000519254 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
CLN8-204ENST00000519254 AOPEPQ8N6M6 819 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 SPATC1LQ9H0A9 340 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
CLN8-204ENST00000519254 NEMFO60524 1076 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 CNMDO75829 334 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 BMP6P22004 513 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
CLN8-204ENST00000519254 SLC30A10Q6XR72 485 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 SPATA20Q8TB22 786 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 CCDC102AQ96A19 550 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 PAGE5Q96GU1 130 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 ACAD9Q9H845 621 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 RBPJLQ9UBG7 517 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 SLC45A1Q9Y2W3 748 aa16.35■□□□□ 0.21
CLN8-204ENST00000519254 GOLGA6L19H0YKK7 550 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 FOSP01100 380 aaPredicted RBP16.34■□□□□ 0.21
CLN8-204ENST00000519254 OR52Z1P0C646 297 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 CDC25AP30304 524 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 HSD17B4P51659 736 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 UBXN2AP68543 259 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 CYP4F22Q6NT55 531 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 RNF207Q6ZRF8 634 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 MAN1B1Q9UKM7 699 aa16.34■□□□□ 0.21
CLN8-204ENST00000519254 BECN2A8MW95 431 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 IGF2BP3O00425 579 aaKnown RBP eCLIP16.33■□□□□ 0.21
CLN8-204ENST00000519254 RPS6P62753 249 aaKnown RBP16.33■□□□□ 0.21
CLN8-204ENST00000519254 TKFCQ3LXA3 575 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 MCTP2Q6DN12 878 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 PDXDC2PQ6P474 469 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 RIOX2Q8IUF8 465 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 ANKRD13CQ8N6S4 541 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 IQUBQ8NA54 791 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 PARK7Q99497 189 aaKnown RBP16.33■□□□□ 0.21
CLN8-204ENST00000519254 MOV10L1Q9BXT6 1211 aaKnown RBP16.33■□□□□ 0.21
CLN8-204ENST00000519254 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 RABGAP1Q9Y3P9 1069 aa16.33■□□□□ 0.21
CLN8-204ENST00000519254 PP2D1A8MPX8 630 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 TDP2O95551 362 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 AFMP43652 599 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 BAATQ14032 418 aaPredicted RBP16.33■□□□□ 0.2
CLN8-204ENST00000519254 Q3C1V9 767 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 SARM1Q6SZW1 724 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 PLA2G4DQ86XP0 818 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 SMARCE1Q969G3 411 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 MTMR9Q96QG7 549 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 PYM1Q9BRP8 204 aaKnown RBP16.33■□□□□ 0.2
CLN8-204ENST00000519254 COL20A1Q9P218 1284 aa16.33■□□□□ 0.2
CLN8-204ENST00000519254 TESPA1A2RU30 521 aaPredicted RBP16.32■□□□□ 0.2
CLN8-204ENST00000519254 ESPNB1AK53 854 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 SLC37A4O43826 429 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 ERCC3P19447 782 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 ZNF75DP51815 510 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 ERVK-24P63145 666 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 ARHGAP4P98171 946 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 MORC3Q14149 939 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 NCAPHQ15003 741 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 CHST13Q8NET6 341 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
CLN8-204ENST00000519254 GTF3C2Q8WUA4 911 aaPredicted RBP16.32■□□□□ 0.2
CLN8-204ENST00000519254 HHIPL1Q96JK4 782 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 CCSER1Q9C0I3 900 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 EHMT1Q9H9B1 1298 aa16.32■□□□□ 0.2
CLN8-204ENST00000519254 RRAGDQ9NQL2 400 aaPredicted RBP16.32■□□□□ 0.2
CLN8-204ENST00000519254 CASP1P29466 404 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 SREBF1P36956 1147 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 APLP1P51693 650 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 DPYDQ12882 1025 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 KARSQ15046 597 aaKnown RBP16.31■□□□□ 0.2
CLN8-204ENST00000519254 PPP4R3AQ6IN85 833 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 TEX2Q8IWB9 1127 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
CLN8-204ENST00000519254 ZIC5Q96T25 663 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 MTRQ99707 1265 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 TRIM5Q9C035 493 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 A1CFQ9NQ94 594 aaKnown RBP16.31■□□□□ 0.2
CLN8-204ENST00000519254 SMC2O95347 1197 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 TXLNAP40222 546 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 SREBF2Q12772 1141 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 TAF1CQ15572 869 aaPredicted RBP16.31■□□□□ 0.2
CLN8-204ENST00000519254 IFNL1Q8IU54 200 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 ANKRD35Q8N283 1001 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 AK8Q96MA6 479 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 TAAR1Q96RJ0 339 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 CYP39A1Q9NYL5 469 aa16.31■□□□□ 0.2
CLN8-204ENST00000519254 FBXO40Q9UH90 709 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms