RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TAPT1Q6NXT6 567 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 FAM173BQ6P4H8 233 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 CTU1Q7Z7A3 348 aaKnown RBP11.29□□□□□ -0.6
CLN8-202ENST00000517514 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 MBOAT7Q96N66 472 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 IWS1Q96ST2 819 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.29□□□□□ -0.6
CLN8-202ENST00000517514 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
CLN8-202ENST00000517514 UBIAD1Q9Y5Z9 338 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 SYNGAP1Q96PV0 1343 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 WDR81Q562E7 1941 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 RBM47A0AV96 593 aaKnown RBP11.28□□□□□ -0.6
CLN8-202ENST00000517514 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 H3BQV1 296 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 TDP2O95551 362 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
CLN8-202ENST00000517514 PTGS1P23219 599 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 CIITAP33076 1130 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
CLN8-202ENST00000517514 NBR1Q14596 966 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
CLN8-202ENST00000517514 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
CLN8-202ENST00000517514 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
CLN8-202ENST00000517514 CHAMP1Q96JM3 812 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 INPP4AQ96PE3 977 aaPredicted RBP11.28□□□□□ -0.6
CLN8-202ENST00000517514 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 RTEL1Q9NZ71 1219 aa11.28□□□□□ -0.6
CLN8-202ENST00000517514 CYP3A7-CYP3A51PA0A087WV96 503 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 ASB14A6NK59 587 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 MEIS1O00470 390 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 SLC37A4O43826 429 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 ARIH2O95376 493 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 F13A1P00488 732 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
CLN8-202ENST00000517514 CYBAP13498 195 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 CYP3A7P24462 503 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 CCND2P30279 289 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 USP11P51784 963 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 ARHGEF6Q15052 776 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLN8-202ENST00000517514 MCTP1Q6DN14 999 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 EEPD1Q7L9B9 569 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.61
CLN8-202ENST00000517514 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 RAET1EQ8TD07 263 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 SH3TC2Q8TF17 1288 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 MXRA8Q9BRK3 442 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 BRMS1Q9HCU9 246 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 JADE2Q9NQC1 790 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 SLC5A4Q9NY91 659 aa11.27□□□□□ -0.61
CLN8-202ENST00000517514 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.26□□□□□ -0.61
CLN8-202ENST00000517514 EIF3JO75822 258 aaKnown RBP11.26□□□□□ -0.61
CLN8-202ENST00000517514 HMGCRP04035 888 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 INHAP05111 366 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 ARP10275 920 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 CCND3P30281 292 aaPredicted RBP11.26□□□□□ -0.61
CLN8-202ENST00000517514 GRK4P32298 578 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 SP2Q02086 613 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 PDE4DQ08499 809 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 ACVR2BQ13705 512 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 STXBP2Q15833 593 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 XRRA1Q6P2D8 792 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 FBXO46Q6PJ61 603 aaPredicted RBP11.26□□□□□ -0.61
CLN8-202ENST00000517514 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
CLN8-202ENST00000517514 SLAIN1Q8ND83 568 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 FTOQ9C0B1 505 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLN8-202ENST00000517514 TMEM60Q9H2L4 133 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 TELO2Q9Y4R8 837 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 PCDHB6Q9Y5E3 794 aa11.26□□□□□ -0.61
CLN8-202ENST00000517514 DNAH12Q6ZR08 3092 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 ATP9AO75110 1047 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
CLN8-202ENST00000517514 ICAM3P32942 547 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 Q4G0T1 1027 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 GJC2Q5T442 439 aaPredicted RBP11.25□□□□□ -0.61
CLN8-202ENST00000517514 PPP4R3AQ6IN85 833 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 NIPA1Q7RTP0 329 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 BRAPQ7Z569 592 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 ETNPPLQ8TBG4 499 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 COPS5Q92905 334 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 GJA10Q969M2 543 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 LENG1Q96BZ8 264 aaPredicted RBP11.25□□□□□ -0.61
CLN8-202ENST00000517514 UIMC1Q96RL1 719 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 ABHD16BQ9H3Z7 469 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 EHMT1Q9H9B1 1298 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 VTA1Q9NP79 307 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms