RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 MRPL12P52815 198 aaKnown RBP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 NAP1L1P55209 391 aaKnown RBP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SIK1P57059 783 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 PPP4CP60510 307 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 HERVK_113P62684 666 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SKOR1P84550 965 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MECOMQ03112 1051 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 GOLGA8FQ08AF8 430 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 GOLGA8DPQ0D2H9 430 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 IFFO1Q0D2I5 559 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 DDB1Q16531 1140 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CDC37Q16543 378 aaPredicted RBP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SLC18A3Q16572 532 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CCDC40Q4G0X9 1142 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 NAALADL2Q58DX5 795 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SLC10A5Q5PT55 438 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 C12orf60Q5U649 245 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 EMC10Q5UCC4 262 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SUSD4Q5VX71 490 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 ICE2Q659A1 982 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 NCAPH2Q6IBW4 605 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MOXD1Q6UVY6 613 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 TPTE2Q6XPS3 522 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CCNI2Q6ZMN8 369 aaPredicted RBP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 KDM7AQ6ZMT4 941 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MMS22LQ6ZRQ5 1243 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 BARGINQ6ZT62 677 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CEP128Q6ZU80 1094 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 USP49Q70CQ1 688 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MAATS1Q7Z4T9 603 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 FBXO33Q7Z6M2 555 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 HOOK3Q86VS8 718 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 C2CD5Q86YS7 1000 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 C10orf67Q8IYJ2 551 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SMYD4Q8IYR2 804 aaPredicted RBP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MYOCDQ8IZQ8 938 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 ANKS4BQ8N8V4 417 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SPATA4Q8NEY3 305 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CCDC26Q8TAB7 109 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 BCAS4Q8TDM0 211 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CUL5Q93034 780 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MED15Q96RN5 788 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CEP89Q96ST8 783 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SH3GL2Q99962 352 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 PLCD4Q9BRC7 762 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 PLVAPQ9BX97 442 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 TRIM34Q9BYJ4 488 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 TANGO6Q9C0B7 1094 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 RAB17Q9H0T7 212 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 BLZF1Q9H2G9 400 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 TAOK3Q9H2K8 898 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 SLITRK6Q9H5Y7 841 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 CNOT10Q9H9A5 744 aaKnown RBP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 METTL14Q9HCE5 456 aaKnown RBP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 BTG4Q9NY30 223 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 LRWD1Q9UFC0 647 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 PARP2Q9UGN5 583 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 RSPH14Q9UHP6 348 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 RASAL2Q9UJF2 1139 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 PCDHA6Q9UN73 950 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 STX8Q9UNK0 236 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MINPP1Q9UNW1 487 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 GDAQ9Y2T3 454 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 PCDHA8Q9Y5H6 950 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 PCDHA13Q9Y5I0 950 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 LRRC37AA6NMS7 1700 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 LY75O60449 1722 aa3.72□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 FLT1P17948 1338 aa3.71□□□□□ -1.81
RNU4ATAC3P-201ENST00000516699 MYH11P35749 1972 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 GTPBP10A4D1E9 387 aaKnown RBP3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 SMCO2A6NFE2 343 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 LRRIQ3A6PVS8 624 aaPredicted RBP3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 GCOM1H8Y6P7 765 aaPredicted RBP3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 PGRMC1O00264 195 aaKnown RBP3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 NDC80O14777 642 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 TBX3O15119 743 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 CETN3O15182 167 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 KLRC4O43908 158 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 ZPR1O75312 459 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 PRDM1O75626 825 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 SYF2O95926 243 aaKnown RBP3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 FAM107AO95990 144 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 HLA-DOAP06340 250 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 MYZAPP0CAP1 466 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 NR1D1P20393 614 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 MUTP22033 750 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 SLC8A1P32418 973 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 PDE6BP35913 854 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 GGCXP38435 758 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 MAGEA1P43355 309 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 GYG1P46976 350 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 GTF2A1P52655 376 aaPredicted RBP3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 NPEPPSP55786 919 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 RPS8P62241 208 aaKnown RBP3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 TFAP4Q01664 338 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 CETN1Q12798 172 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 AP3B2Q13367 1082 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 SLMAPQ14BN4 828 aa3.71□□□□□ -1.82
RNU4ATAC3P-201ENST00000516699 NAB2Q15742 525 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms