RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 STXBP2Q15833 593 aa23.89■■□□□ 1.41
LSM6-207ENST00000515311 MOXD1Q6UVY6 613 aa23.89■■□□□ 1.41
LSM6-207ENST00000515311 TRIM17Q9Y577 477 aa23.89■■□□□ 1.41
LSM6-207ENST00000515311 CYP3A7-CYP3A51PA0A087WV96 503 aa23.88■■□□□ 1.41
LSM6-207ENST00000515311 EDIL3O43854 480 aa23.88■■□□□ 1.41
LSM6-207ENST00000515311 EIF3JO75822 258 aaKnown RBP23.88■■□□□ 1.41
LSM6-207ENST00000515311 GCFC2P16383 781 aaKnown RBP23.88■■□□□ 1.41
LSM6-207ENST00000515311 CYP3A7P24462 503 aa23.88■■□□□ 1.41
LSM6-207ENST00000515311 MRPS9P82933 396 aaKnown RBP23.88■■□□□ 1.41
LSM6-207ENST00000515311 FOXD4L5Q5VV16 416 aaPredicted RBP23.88■■□□□ 1.41
LSM6-207ENST00000515311 MYSM1Q5VVJ2 828 aa23.88■■□□□ 1.41
LSM6-207ENST00000515311 ARMCX2Q7L311 632 aa23.88■■□□□ 1.41
LSM6-207ENST00000515311 FOXD4L4Q8WXT5 416 aaPredicted RBP23.88■■□□□ 1.41
LSM6-207ENST00000515311 MYCLP12524 364 aaPredicted RBP23.87■■□□□ 1.41
LSM6-207ENST00000515311 TOB1P50616 345 aaPredicted RBP23.87■■□□□ 1.41
LSM6-207ENST00000515311 ORC2Q13416 577 aaPredicted RBP23.87■■□□□ 1.41
LSM6-207ENST00000515311 CCL14Q16627 93 aa23.87■■□□□ 1.41
LSM6-207ENST00000515311 PPP4R3AQ6IN85 833 aa23.87■■□□□ 1.41
LSM6-207ENST00000515311 NIPA1Q7RTP0 329 aa23.87■■□□□ 1.41
LSM6-207ENST00000515311 PXYLP1Q8TE99 480 aa23.87■■□□□ 1.41
LSM6-207ENST00000515311 FLRT1Q9NZU1 646 aa23.87■■□□□ 1.41
LSM6-207ENST00000515311 ATP6V1DQ9Y5K8 247 aa23.87■■□□□ 1.41
LSM6-207ENST00000515311 LETM2Q2VYF4 491 aa23.86■■□□□ 1.41
LSM6-207ENST00000515311 CEP55Q53EZ4 464 aa23.86■■□□□ 1.41
LSM6-207ENST00000515311 POTEDQ86YR6 584 aa23.86■■□□□ 1.41
LSM6-207ENST00000515311 RAET1EQ8TD07 263 aa23.86■■□□□ 1.41
LSM6-207ENST00000515311 MBOAT7Q96N66 472 aa23.86■■□□□ 1.41
LSM6-207ENST00000515311 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.86■■□□□ 1.41
LSM6-207ENST00000515311 UBIAD1Q9Y5Z9 338 aa23.86■■□□□ 1.41
LSM6-207ENST00000515311 ZNF76P36508 570 aa23.85■■□□□ 1.41
LSM6-207ENST00000515311 TTC38Q5R3I4 469 aa23.85■■□□□ 1.41
LSM6-207ENST00000515311 TRIB2Q92519 343 aa23.85■■□□□ 1.41
LSM6-207ENST00000515311 INPP4AQ96PE3 977 aaPredicted RBP23.85■■□□□ 1.41
LSM6-207ENST00000515311 MXRA8Q9BRK3 442 aa23.85■■□□□ 1.41
LSM6-207ENST00000515311 VTA1Q9NP79 307 aa23.85■■□□□ 1.41
LSM6-207ENST00000515311 NRBP1Q9UHY1 535 aa23.85■■□□□ 1.41
LSM6-207ENST00000515311 DDX49Q9Y6V7 483 aaKnown RBP23.85■■□□□ 1.41
LSM6-207ENST00000515311 IGLV3-22A0A075B6J6 115 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 FAM86B1E9PN63 330 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 MEIS1O00470 390 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 ADCY3O60266 1144 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 CCNT1O60563 726 aaKnown RBP23.84■■□□□ 1.41
LSM6-207ENST00000515311 SNAI1O95863 264 aaPredicted RBP23.84■■□□□ 1.41
LSM6-207ENST00000515311 FAM86B2P0C5J1 330 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 ITGB5P18084 799 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 GNPTABQ3T906 1256 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 MFSD14CQ5VZR4 134 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 CTU1Q7Z7A3 348 aaKnown RBP23.84■■□□□ 1.41
LSM6-207ENST00000515311 SLAIN1Q8ND83 568 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 ABHD16BQ9H3Z7 469 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 PTPN22Q9Y2R2 807 aa23.84■■□□□ 1.41
LSM6-207ENST00000515311 TDP2O95551 362 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 SETQ01105 290 aaPredicted RBP23.83■■□□□ 1.41
LSM6-207ENST00000515311 Q4G0T1 1027 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 ATL3Q6DD88 541 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 FAM173BQ6P4H8 233 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 NLRX1Q86UT6 975 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 GPRASP2Q96D09 838 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 KATNBL1Q9H079 304 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 JADE2Q9NQC1 790 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 CNPY2Q9Y2B0 182 aa23.83■■□□□ 1.41
LSM6-207ENST00000515311 WNT7AO00755 349 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 RGS20O76081 388 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 HMGCRP04035 888 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 CYP2C19P33261 490 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 CYP2W1Q8TAV3 490 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 LENG9Q96B70 501 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 CDHR1Q96JP9 859 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 ZNF396Q96N95 335 aaPredicted RBP23.82■■□□□ 1.4
LSM6-207ENST00000515311 PRDM10Q9NQV6 1147 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 RTEL1Q9NZ71 1219 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 DDX25Q9UHL0 483 aaKnown RBP23.82■■□□□ 1.4
LSM6-207ENST00000515311 PTCH2Q9Y6C5 1203 aa23.82■■□□□ 1.4
LSM6-207ENST00000515311 MAFGO15525 162 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 FIBPO43427 364 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 ELNP15502 786 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 ATP2B1P20020 1258 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 ICAM3P32942 547 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 MTMR1Q13613 665 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 ACVR2BQ13705 512 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 PKN2Q16513 984 aaKnown RBP23.81■■□□□ 1.4
LSM6-207ENST00000515311 PRR16Q569H4 304 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 FBXO16Q8IX29 292 aaPredicted RBP23.81■■□□□ 1.4
LSM6-207ENST00000515311 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.81■■□□□ 1.4
LSM6-207ENST00000515311 PCDHB6Q9Y5E3 794 aa23.81■■□□□ 1.4
LSM6-207ENST00000515311 SLC37A4O43826 429 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 NEMFO60524 1076 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 BMP15O95972 392 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 MCM7P33993 719 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 NBR1Q14596 966 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 KCNV1Q6PIU1 500 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 PLA2G4DQ86XP0 818 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 SCFD2Q8WU76 684 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 ZFP91Q96JP5 570 aaPredicted RBP23.8■■□□□ 1.4
LSM6-207ENST00000515311 WDR11Q9BZH6 1224 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 KCNH7Q9NS40 1196 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 HTTP42858 3142 aa23.8■■□□□ 1.4
LSM6-207ENST00000515311 RBM47A0AV96 593 aaKnown RBP23.79■■□□□ 1.4
LSM6-207ENST00000515311 SPATA31C2B4DYI2 1134 aa23.79■■□□□ 1.4
LSM6-207ENST00000515311 TGFB3P10600 412 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms