RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 RMDN3Q96TC7 470 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 DDX41Q9UJV9 622 aaKnown RBP17.55■□□□□ 0.4
DDR1-278ENST00000515233 MTCH2Q9Y6C9 303 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 TET1Q8NFU7 2136 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 EIF3JO75822 258 aaKnown RBP17.54■□□□□ 0.4
DDR1-278ENST00000515233 BMP1P13497 986 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 GHRHRQ02643 423 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 NUCB1Q02818 461 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 GPNMBQ14956 572 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 DGKDQ16760 1214 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 IMMTQ16891 758 aaKnown RBP17.54■□□□□ 0.4
DDR1-278ENST00000515233 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
DDR1-278ENST00000515233 UHRF1Q96T88 793 aaPredicted RBP17.54■□□□□ 0.4
DDR1-278ENST00000515233 KRT23Q9C075 422 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 DIAPH3Q9NSV4 1193 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 MAP3K20Q9NYL2 800 aaKnown RBP17.54■□□□□ 0.4
DDR1-278ENST00000515233 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 MYH6P13533 1939 aa17.54■□□□□ 0.4
DDR1-278ENST00000515233 RFXAPO00287 272 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 GTPBP6O43824 516 aaPredicted RBP17.53■□□□□ 0.4
DDR1-278ENST00000515233 IGHDP01880 384 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 NR3C2P08235 984 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 PARP1P09874 1014 aaKnown RBP17.53■□□□□ 0.4
DDR1-278ENST00000515233 TAP1Q03518 808 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 AAK1Q2M2I8 961 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 VAT1LQ9HCJ6 419 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 GTF2IRD1Q9UHL9 959 aa17.53■□□□□ 0.4
DDR1-278ENST00000515233 SELPP16109 830 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 HSD17B4P51659 736 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 CHMP4BP1P59074 171 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 LAMC2Q13753 1193 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 CHST3Q7LGC8 479 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 SAMD3Q8N6K7 520 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 DHX38Q92620 1227 aaKnown RBP17.52■□□□□ 0.4
DDR1-278ENST00000515233 KATNAL1Q9BW62 490 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 AMNQ9BXJ7 453 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 CERS4Q9HA82 394 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 PXMP2Q9NR77 195 aa17.52■□□□□ 0.4
DDR1-278ENST00000515233 XIRP2A4UGR9 3374 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 EPOPA6NHQ4 379 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 HAS3O00219 553 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 OPLAHO14841 1288 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 DHX16O60231 1041 aaKnown RBP17.51■□□□□ 0.39
DDR1-278ENST00000515233 ARHGEF15O94989 841 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 CFBP00751 764 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 CXCL10P02778 98 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 EIF2AK2P19525 551 aaKnown RBP17.51■□□□□ 0.39
DDR1-278ENST00000515233 KCNJ6P48051 423 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 LRRC8DQ7L1W4 858 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 MICALL1Q8N3F8 863 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 PPTC7Q8NI37 304 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 HDAC6Q9UBN7 1215 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 MYH7BA7E2Y1 1941 aa17.51■□□□□ 0.39
DDR1-278ENST00000515233 PRRC2BQ5JSZ5 2229 aaKnown RBP17.5■□□□□ 0.39
DDR1-278ENST00000515233 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 TLL1O43897 1013 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 CKBP12277 381 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 COL9A1P20849 921 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 PSEN2P49810 448 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
DDR1-278ENST00000515233 TFF2Q03403 129 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 PTK7Q13308 1070 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 SEC23AQ15436 765 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 IFIT1BQ5T764 474 aaKnown RBP17.5■□□□□ 0.39
DDR1-278ENST00000515233 CNKSR3Q6P9H4 555 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 KCNV1Q6PIU1 500 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 STOX1Q6ZVD7 989 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 DHX37Q8IY37 1157 aaKnown RBP17.5■□□□□ 0.39
DDR1-278ENST00000515233 STAG2Q8N3U4 1231 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 C7orf31Q8N865 590 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 ARNTL2Q8WYA1 636 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 UBAC1Q9BSL1 405 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 COG5Q9UP83 839 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 MRVI1Q9Y6F6 885 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 PTPRSQ13332 1948 aa17.5■□□□□ 0.39
DDR1-278ENST00000515233 ABHD14A-ACY1A0A1B0GW23 586 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 ZBTB5O15062 677 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 NBNO60934 754 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 PPFIA4O75335 1185 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 RGS20O76081 388 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 F2P00734 622 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 HOXD8P13378 290 aaPredicted RBP17.49■□□□□ 0.39
DDR1-278ENST00000515233 SKIV2LQ15477 1246 aaKnown RBP17.49■□□□□ 0.39
DDR1-278ENST00000515233 MYSM1Q5VVJ2 828 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 PDCD2LQ9BRP1 358 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 MAD2L2Q9UI95 211 aa17.49■□□□□ 0.39
DDR1-278ENST00000515233 TCF20Q9UGU0 1960 aaKnown RBP17.49■□□□□ 0.39
DDR1-278ENST00000515233 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
DDR1-278ENST00000515233 EFCAB14O75071 495 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 TGFB3P10600 412 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 GRB10Q13322 594 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 MFSD10Q14728 455 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 KIAA0753Q2KHM9 967 aa17.48■□□□□ 0.39
DDR1-278ENST00000515233 TRIM71Q2Q1W2 868 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms