RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 ERVV-1B6SEH8 477 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 S100BP04271 92 aaPredicted RBP17.45■□□□□ 0.38
TRIM41-207ENST00000515223 TRAPPC10P48553 1259 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 ARHGAP4P98171 946 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 KCTD1Q719H9 257 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 SCYL1Q96KG9 808 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 TRIM56Q9BRZ2 755 aaKnown RBP17.45■□□□□ 0.38
TRIM41-207ENST00000515223 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 PCDHB4Q9Y5E5 795 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 TROVE2P10155 538 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIM41-207ENST00000515223 POLR2FP61218 127 aaKnown RBP17.45■□□□□ 0.38
TRIM41-207ENST00000515223 TYW1Q9NV66 732 aaKnown RBP17.45■□□□□ 0.38
TRIM41-207ENST00000515223 AATKQ6ZMQ8 1374 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 H7C0C1 242 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 KCNK3O14649 394 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 ATP5OP48047 213 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 UBXN2AP68543 259 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 EXOC3L4Q17RC7 722 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 TTC1Q99614 292 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 CLTCL1P53675 1640 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
TRIM41-207ENST00000515223 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
TRIM41-207ENST00000515223 GARSP41250 739 aaKnown RBP17.44■□□□□ 0.38
TRIM41-207ENST00000515223 ACCSQ96QU6 501 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 MYL7Q01449 175 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 BBOF1Q8ND07 529 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 SAR1BQ9Y6B6 198 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 SHROOM2Q13796 1616 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 USP27XA6NNY8 438 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 KRIT1O00522 736 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 RNF40O75150 1001 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 MASTLQ96GX5 879 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 DDX41Q9UJV9 622 aaKnown RBP17.44■□□□□ 0.38
TRIM41-207ENST00000515223 MMP10P09238 476 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 ARPP19P56211 112 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 IQGAP3Q86VI3 1631 aa17.44■□□□□ 0.38
TRIM41-207ENST00000515223 MYO1FO00160 1098 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 MKRN3Q13064 507 aaKnown RBP17.43■□□□□ 0.38
TRIM41-207ENST00000515223 PPFIA1Q13136 1202 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 SEPT6Q14141 434 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 PPP1R2P3Q6NXS1 205 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
TRIM41-207ENST00000515223 TRIM11Q96F44 468 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 COA1Q9GZY4 146 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 FAM170AA1A519 330 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 RGS16O15492 202 aaPredicted RBP17.43■□□□□ 0.38
TRIM41-207ENST00000515223 SYDE2Q5VT97 1194 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 AK8Q96MA6 479 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 RNF26Q9BY78 433 aaPredicted RBP17.43■□□□□ 0.38
TRIM41-207ENST00000515223 ZNF148Q9UQR1 794 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 CYP2E1P05181 493 aaPredicted RBP17.43■□□□□ 0.38
TRIM41-207ENST00000515223 STX2P32856 288 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 NECTIN1Q15223 517 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 SH2D4BQ5SQS7 431 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
TRIM41-207ENST00000515223 HEXIM1O94992 359 aaKnown RBP17.43■□□□□ 0.38
TRIM41-207ENST00000515223 ANXA13P27216 316 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 WHAMMP3Q1A5X7 153 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 BAG5Q9UL15 447 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 PCDHA5Q9Y5H7 936 aa17.43■□□□□ 0.38
TRIM41-207ENST00000515223 TTC36A6NLP5 189 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 ADORA1P30542 326 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 MYO1EQ12965 1108 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 GRAPQ13588 217 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 RSRC1Q96IZ7 334 aaKnown RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 LRRC4Q9HBW1 653 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 PCDHA4Q9UN74 947 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 HYOU1Q9Y4L1 999 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 POLR1AO95602 1720 aaPredicted RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 A0A1W2PQ27 194 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 A0A1W2PQ64 194 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 A0A1W2PQD8 194 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 LARP4BQ92615 738 aaKnown RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 VPS41P49754 854 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 TTC19Q6DKK2 380 aaPredicted RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 FBXO18Q8NFZ0 1043 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 TMEM206Q9H813 350 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 ADCY10Q96PN6 1610 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 EEPD1Q7L9B9 569 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 GRAMD1CQ8IYS0 662 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 SEC31BQ9NQW1 1179 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 FAM114A2Q9NRY5 505 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 BZW2Q9Y6E2 419 aaKnown RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 M0R2C6 588 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 HGSO14964 777 aaPredicted RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 CSPG5O95196 566 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 PSAPP07602 524 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 GBP1P32455 592 aa17.42■□□□□ 0.38
TRIM41-207ENST00000515223 PSMC2P35998 433 aaKnown RBP17.42■□□□□ 0.38
TRIM41-207ENST00000515223 KRT3P12035 628 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 EFCAB13Q8IY85 973 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 PGBD1Q96JS3 809 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 CABS1Q96KC9 395 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms