RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OPA1O60313 960 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 CKMP06732 381 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 SRGAP2CP0DJJ0 459 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 IGFALSP35858 605 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 CYP4F8P98187 520 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 FILIP1Q7Z7B0 1213 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 IFT57Q9NWB7 429 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 PRKAB1Q9Y478 270 aa7.4□□□□□ -1.22
HMGCS1-207ENST00000514610 WNT9AO14904 365 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 PNLIPP16233 465 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 NAT1P18440 290 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 SDHBP21912 280 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 AFMP43652 599 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 SNX17Q15036 470 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 TAF7LQ5H9L4 462 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 ZC3H7AQ8IWR0 971 aaKnown RBP7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 DDX1Q92499 740 aaKnown RBP7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 TRMT2BQ96GJ1 504 aaKnown RBP7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 KIRREL1Q96J84 757 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 KCNJ15Q99712 375 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 TNFRSF12AQ9NP84 129 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 CRTAC1Q9NQ79 661 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 YBX2Q9Y2T7 364 aaKnown RBP7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 COQ6Q9Y2Z9 468 aa7.39□□□□□ -1.23
HMGCS1-207ENST00000514610 FAM47E-STBD1D6RA91 191 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 PDE8AO60658 829 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 DNAJC6O75061 913 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 VIL1P09327 827 aaKnown RBP7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 JMJD7P0C870 316 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 GLI4P10075 376 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 RNF187Q5TA31 235 aaPredicted RBP7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 ZCCHC8Q6NZY4 707 aaKnown RBP7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 RNF180Q86T96 592 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 ATG4DQ86TL0 474 aaPredicted RBP7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 GPATCH3Q96I76 525 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 MTFR1LQ9H019 292 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 SPC25Q9HBM1 224 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 CBLCQ9ULV8 474 aa7.38□□□□□ -1.23
HMGCS1-207ENST00000514610 GLRX3O76003 335 aaKnown RBP7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 PAPLNO95428 1278 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 NTRK1P04629 796 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 PYGMP11217 842 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 POU3F2P20265 443 aaPredicted RBP7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 STAT3P40763 770 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 PCBP1Q15365 356 aaKnown RBP eCLIP7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 BICRALQ6AI39 1079 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 WWC2Q6AWC2 1192 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 RIOX2Q8IUF8 465 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 IGSF22Q8N9C0 903 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 USP33Q8TEY7 942 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 FAM126AQ9BYI3 521 aaPredicted RBP7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 RXFP1Q9HBX9 757 aa7.37□□□□□ -1.23
HMGCS1-207ENST00000514610 CCDC66A2RUB6 948 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 KPNA6O60684 536 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 DBHP09172 617 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 COL6A2P12110 1019 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 DNM2P50570 870 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 SEPT7Q16181 437 aaKnown RBP7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 HABP4Q5JVS0 413 aaKnown RBP7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 MROH9Q5TGP6 573 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 PIK3R6Q5UE93 754 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 CDCA2Q69YH5 1023 aaPredicted RBP7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 KRT26Q7Z3Y9 468 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 UBR7Q8N806 425 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 FBXW5Q969U6 566 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 CELF4Q9BZC1 486 aaKnown RBP7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 SAMD15Q9P1V8 674 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 SIT1Q9Y3P8 196 aa7.36□□□□□ -1.23
HMGCS1-207ENST00000514610 TCRBV5S4A2TA0A5A2 114 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 ITGB5P18084 799 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 POU3F3P20264 500 aaPredicted RBP7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 ERVFRD-1P60508 538 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 PKN3Q6P5Z2 889 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 C16orf59Q7L2K0 433 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 OVCH1Q7RTY7 1134 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 CISD2Q8N5K1 135 aaKnown RBP7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 PIP4K2CQ8TBX8 421 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 INTS4Q96HW7 963 aaKnown RBP7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 EPB41L1Q9H4G0 881 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 MAPRE3Q9UPY8 281 aa7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 COA3Q9Y2R0 106 aaPredicted RBP7.35□□□□□ -1.23
HMGCS1-207ENST00000514610 A0A1W2PQJ5 194 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 B4E1Z4 1266 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 M0R2C6 588 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 NKRFO15226 690 aaKnown RBP eCLIP7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 NEK4P51957 841 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 SKOR2Q2VWA4 1001 aaPredicted RBP7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 CFAP100Q494V2 611 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 TMEM177Q53S58 311 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 OTOP3Q7RTS5 596 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 DDX53Q86TM3 631 aaKnown RBP7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 ZSWIM9Q86XI8 627 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 PPM1KQ8N3J5 372 aa7.34□□□□□ -1.23
HMGCS1-207ENST00000514610 ZC3H12DA2A288 527 aaKnown RBP7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 CBX4O00257 560 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 DGKIO75912 1065 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms