RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	SH3TC2	Q8TF17	1288 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	MCOLN1	Q9GZU1	580 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	FOXP1	Q9H334	677 aa	Predicted RBP	11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	NRBP1	Q9UHY1	535 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	DDX49	Q9Y6V7	483 aa	Known RBP	11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	STAM2	O75886	525 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	INHA	P05111	366 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	CYP3A4	P08684	503 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	PRKAR2A	P13861	404 aa	Known RBP	11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	SYT1	P21579	422 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	ZNF76	P36508	570 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	SREBF1	P36956	1147 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	USP11	P51784	963 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	TRIM32	Q13049	653 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	PCNX4	Q63HM2	1172 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	MCTP1	Q6DN14	999 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	PIK3AP1	Q6ZUJ8	805 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	IL31RA	Q8NI17	732 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	TBCK	Q8TEA7	893 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	ZFP91	Q96JP5	570 aa	Predicted RBP	11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	VTA1	Q9NP79	307 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	RTEL1	Q9NZ71	1219 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	FRMPD4	Q14CM0	1322 aa		11.28	□□□□□ -0.6
RACK1-233	ENST00000514455	MCM3AP	O60318	1980 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	STX6	O43752	255 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	U2AF2	P26368	475 aa	Known RBP eCLIP	11.27	□□□□□ -0.61	9e-11	■■□□□ 11.4
RACK1-233	ENST00000514455	CNGA1	P29973	690 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	MRPS9	P82933	396 aa	Known RBP	11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	ARHGAP4	P98171	946 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	INF2	Q27J81	1249 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	MAP3K21	Q5TCX8	1036 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	IQSEC1	Q6DN90	963 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	TAPT1	Q6NXT6	567 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	SEPT14	Q6ZU15	432 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	CRYGN	Q8WXF5	182 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	TNFRSF25	Q93038	417 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	HMX1	Q9NP08	348 aa	Predicted RBP	11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	FAM184B	Q9ULE4	1060 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	LCT	P09848	1927 aa		11.27	□□□□□ -0.61
RACK1-233	ENST00000514455	VPS37C	A5D8V6	355 aa	Predicted RBP	11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	MAFG	O15525	162 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	CYBA	P13498	195 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	GNPTAB	Q3T906	1256 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	EARS2	Q5JPH6	523 aa	Known RBP	11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	KCNV1	Q6PIU1	500 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	NLRX1	Q86UT6	975 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	NOSTRIN	Q8IVI9	506 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	FBXO16	Q8IX29	292 aa	Predicted RBP	11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	TRPV1	Q8NER1	839 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	ARMC5	Q96C12	935 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	MXRA8	Q9BRK3	442 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	KATNBL1	Q9H079	304 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	JADE2	Q9NQC1	790 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	PDGFC	Q9NRA1	345 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	UBIAD1	Q9Y5Z9	338 aa		11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.26	□□□□□ -0.61
RACK1-233	ENST00000514455	RBM47	A0AV96	593 aa	Known RBP	11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	KIF28P	B7ZC32	967 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	MEIS1	O00470	390 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	SEPT4	O43236	478 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	EDIL3	O43854	480 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	RGS20	O76081	388 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	MYC	P01106	439 aa	Predicted RBP	11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	TGFB3	P10600	412 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	ITGB5	P18084	799 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	CCND3	P30281	292 aa	Predicted RBP	11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	CIITA	P33076	1130 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	ADCYAP1R1	P41586	468 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	TNFAIP2	Q03169	654 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	LETM2	Q2VYF4	491 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	CCDC144B	Q3MJ40	725 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	CEP55	Q53EZ4	464 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	NEK8	Q86SG6	692 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	CYP2W1	Q8TAV3	490 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	SCFD2	Q8WU76	684 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	ZNF333	Q96JL9	665 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	INPP4A	Q96PE3	977 aa	Predicted RBP	11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	NAP1L4	Q99733	375 aa	Known RBP	11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	WDR11	Q9BZH6	1224 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	MTMR6	Q9Y217	621 aa		11.25	□□□□□ -0.61
RACK1-233	ENST00000514455	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	FAM205C	A6NFA0	338 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	SPATA31C2	B4DYI2	1134 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	FAM86B1	E9PN63	330 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	FAM86B2	P0C5J1	330 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	TXN	P10599	105 aa	Known RBP	11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	CCL5	P13501	91 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	AKR1A1	P14550	325 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	ATP2B1	P20020	1258 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	CYP3A7	P24462	503 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	ICAM3	P32942	547 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	TTLL4	Q14679	1199 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	MTFR1	Q15390	333 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	PPP4R3A	Q6IN85	833 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	MOXD1	Q6UVY6	613 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	NIPA1	Q7RTP0	329 aa		11.24	□□□□□ -0.61
RACK1-233	ENST00000514455	FERMT3	Q86UX7	667 aa		11.24	□□□□□ -0.61

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