RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MYO9BQ13459 2157 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 DOCK5Q9H7D0 1870 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 GOLGA8CPA6NN73 597 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 TLR3O15455 904 aaKnown RBP11.45□□□□□ -0.58
CCL28-203ENST00000513525 DYNC1LI2O43237 492 aaPredicted RBP11.45□□□□□ -0.58
CCL28-203ENST00000513525 CD4P01730 458 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 CYP21A2P08686 494 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 FPGSQ05932 587 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 NBR1Q14596 966 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 USH1GQ495M9 461 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 IFIT1BQ5T764 474 aaKnown RBP11.45□□□□□ -0.58
CCL28-203ENST00000513525 CXCL17Q6UXB2 119 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 VTI1AQ96AJ9 217 aa11.45□□□□□ -0.58
CCL28-203ENST00000513525 B4DLN1 442 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 NKRFO15226 690 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCL28-203ENST00000513525 SGSM2O43147 1006 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 MRPL12P52815 198 aaKnown RBP11.44□□□□□ -0.58
CCL28-203ENST00000513525 ANAPC15P60006 121 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 SMAD3P84022 425 aaKnown RBP11.44□□□□□ -0.58
CCL28-203ENST00000513525 PTH1RQ03431 593 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 PDE4DQ08499 809 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 TRDNQ13061 729 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 QRICH1Q2TAL8 776 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 MFSD5Q6N075 450 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 IL17RAQ96F46 866 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 SLC4A5Q9BY07 1137 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 WDR11Q9BZH6 1224 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 JMJD4Q9H9V9 463 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
CCL28-203ENST00000513525 STXBP5LQ9Y2K9 1186 aa11.44□□□□□ -0.58
CCL28-203ENST00000513525 GRIN2DO15399 1336 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 PPP1R37O75864 691 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 PTGS1P23219 599 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 CPT1AP50416 773 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 EPHB4P54760 987 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 GHRHRQ02643 423 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 ITGA7Q13683 1181 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 MCF2L2Q86YR7 1114 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 STAG2Q8N3U4 1231 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 SCFD2Q8WU76 684 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 MTMR8Q96EF0 704 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 POLR3EQ9NVU0 708 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 MAD2L2Q9UI95 211 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 MRPL11Q9Y3B7 192 aaKnown RBP11.43□□□□□ -0.58
CCL28-203ENST00000513525 EYSQ5T1H1 3165 aa11.43□□□□□ -0.58
CCL28-203ENST00000513525 UNC80Q8N2C7 3258 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 KAT6AQ92794 2004 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 K7ELQ4 463 aaPredicted RBP11.42□□□□□ -0.58
CCL28-203ENST00000513525 PURAQ00577 322 aaKnown RBP11.42□□□□□ -0.58
CCL28-203ENST00000513525 PPIGQ13427 754 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCL28-203ENST00000513525 PPP2R5BQ15173 497 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 NFKBIBQ15653 356 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 ZNF697Q5TEC3 545 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 THSD4Q6ZMP0 1018 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 NCOA7Q8NI08 942 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
CCL28-203ENST00000513525 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 TET1Q8NFU7 2136 aa11.42□□□□□ -0.58
CCL28-203ENST00000513525 PTPRSQ13332 1948 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 ERICH2A1L162 156 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 PALM3A6NDB9 673 aaPredicted RBP11.41□□□□□ -0.58
CCL28-203ENST00000513525 KLRF2D3W0D1 207 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 E7EWF7 191 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
CCL28-203ENST00000513525 RALYLQ86SE5 291 aaKnown RBP11.41□□□□□ -0.58
CCL28-203ENST00000513525 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 SAMD3Q8N6K7 520 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 OR6J1Q8NGC5 347 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 SYTL5Q8TDW5 730 aaPredicted RBP11.41□□□□□ -0.58
CCL28-203ENST00000513525 NSUN6Q8TEA1 469 aaKnown RBP11.41□□□□□ -0.58
CCL28-203ENST00000513525 TBC1D5Q92609 795 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 IWS1Q96ST2 819 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCL28-203ENST00000513525 AMNQ9BXJ7 453 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
CCL28-203ENST00000513525 MAP3K20Q9NYL2 800 aaKnown RBP11.41□□□□□ -0.58
CCL28-203ENST00000513525 COL20A1Q9P218 1284 aa11.41□□□□□ -0.58
CCL28-203ENST00000513525 TMEM265A0A087WTH1 108 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 A6NJR5 290 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 OPLAHO14841 1288 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 IFIT3O14879 490 aaKnown RBP11.4□□□□□ -0.58
CCL28-203ENST00000513525 ZBTB5O15062 677 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 HSD17B4P51659 736 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 TTLL4Q14679 1199 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 GRM4Q14833 912 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 SART3Q15020 963 aaKnown RBP11.4□□□□□ -0.58
CCL28-203ENST00000513525 BRDTQ58F21 947 aaPredicted RBP11.4□□□□□ -0.58
CCL28-203ENST00000513525 STOX1Q6ZVD7 989 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 GUCD1Q96NT3 240 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 TAAR1Q96RJ0 339 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 PPP1R12CQ9BZL4 782 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 RIOX1Q9H6W3 641 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 VAT1LQ9HCJ6 419 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 TAF6LQ9Y6J9 622 aa11.4□□□□□ -0.58
CCL28-203ENST00000513525 B4GALT4O60513 344 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 KPNA6O60684 536 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms