RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FBXW5Q969U6 566 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 C1orf159Q96HA4 380 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 WNK4Q96J92 1243 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 KCNJ15Q99712 375 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.82□□□□□ -1.48
HTT-210ENST00000512909 IFT57Q9NWB7 429 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 IMPACTQ9P2X3 320 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 TMEFF2Q9UIK5 374 aaPredicted RBP5.82□□□□□ -1.48
HTT-210ENST00000512909 NUDT5Q9UKK9 219 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 ZKSCAN5Q9Y2L8 839 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 RWDD3Q9Y3V2 267 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 C22orf46C9J442 243 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 PDE8AO60658 829 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 RASGRP1O95267 797 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 NPTXRO95502 500 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 SOD2P04179 222 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 JMJD7P0C870 316 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 LCP1P13796 627 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 TACR1P25103 407 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 CORO7P57737 925 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 SNX17Q15036 470 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 CRY1Q16526 586 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 INF2Q27J81 1249 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 ZNF792Q3KQV3 632 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 HSF5Q4G112 596 aaPredicted RBP5.81□□□□□ -1.48
HTT-210ENST00000512909 DDX46Q7L014 1031 aaKnown RBP5.81□□□□□ -1.48
HTT-210ENST00000512909 LRRTM3Q86VH5 581 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 TEX2Q8IWB9 1127 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 SIRT2Q8IXJ6 389 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 Q8N3U1 123 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 LEO1Q8WVC0 666 aaPredicted RBP5.81□□□□□ -1.48
HTT-210ENST00000512909 JMJD8Q96S16 334 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 AP5M1Q9H0R1 490 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 CAAP1Q9H8G2 361 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 PDLIM7Q9NR12 457 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.81□□□□□ -1.48
HTT-210ENST00000512909 TNPO3Q9Y5L0 923 aaKnown RBP5.81□□□□□ -1.48
HTT-210ENST00000512909 PRDM2Q13029 1718 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 GAPVD1Q14C86 1478 aa5.81□□□□□ -1.48
HTT-210ENST00000512909 GRIN2BQ13224 1484 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 SNAPC4Q5SXM2 1469 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.8□□□□□ -1.48
HTT-210ENST00000512909 HYAL3O43820 417 aaPredicted RBP5.8□□□□□ -1.48
HTT-210ENST00000512909 NRDCO43847 1150 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 KPNA6O60684 536 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 GAS7O60861 476 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 C6orf222P0C671 652 aaPredicted RBP5.8□□□□□ -1.48
HTT-210ENST00000512909 PDE6BP35913 854 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 MASP1P48740 699 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 TMEM62Q0P6H9 643 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 MROH9Q5TGP6 573 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 PIK3R6Q5UE93 754 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 DENND5AQ6IQ26 1287 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 SLCO6A1Q86UG4 719 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 LINC01599Q8WXQ3 324 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 USP7Q93009 1102 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 KIRREL1Q96J84 757 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 CLUHP3Q96NS8 147 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 EPB41L1Q9H4G0 881 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 ZFP64Q9NPA5 681 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 MCM8Q9UJA3 840 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 MAPRE3Q9UPY8 281 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 NPFFR2Q9Y5X5 522 aa5.8□□□□□ -1.48
HTT-210ENST00000512909 CAPNS1P04632 268 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 HSP90B1P14625 803 aaKnown RBP5.79□□□□□ -1.48
HTT-210ENST00000512909 SCNN1BP51168 640 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 GP2P55259 537 aaKnown RBP5.79□□□□□ -1.48
HTT-210ENST00000512909 TESK1Q15569 626 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 TM4SF20Q53R12 229 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 OLFML2BQ68BL8 750 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 FGD2Q7Z6J4 655 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 DCP2Q8IU60 420 aaKnown RBP5.79□□□□□ -1.48
HTT-210ENST00000512909 CCDC103Q8IW40 242 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 C2orf69Q8N8R5 385 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 TMEM52Q8NDY8 209 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 GSTCDQ8NEC7 633 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 OR2W6PQ8NHA6 318 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 ATL2Q8NHH9 583 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 YIPF4Q9BSR8 244 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 C19orf44Q9H6X5 657 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 IPPKQ9H8X2 491 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 SAMD15Q9P1V8 674 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 COL4A3BPQ9Y5P4 624 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 ASXL2Q76L83 1435 aa5.79□□□□□ -1.48
HTT-210ENST00000512909 EIF4G3O43432 1585 aaKnown RBP5.79□□□□□ -1.48
HTT-210ENST00000512909 TARBP1Q13395 1621 aaKnown RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 TCRBV16S1A1N1A0A5B0 115 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 CCDC66A2RUB6 948 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 KCNQ2O43526 872 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 DNAJC8O75937 253 aaPredicted RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 HPXP02790 462 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 MPOP05164 745 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 RNASE1P07998 156 aaKnown RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 KRT15P19012 456 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 SDSP20132 328 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 NFKB2Q00653 900 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 NR0B2Q15466 257 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 KCNMB1Q16558 191 aa5.78□□□□□ -1.48
HTT-210ENST00000512909 CDCA2Q69YH5 1023 aaPredicted RBP5.78□□□□□ -1.48
HTT-210ENST00000512909 ZCCHC8Q6NZY4 707 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms