RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 DPF3Q92784 378 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 IPO9Q96P70 1041 aaKnown RBP4.84□□□□□ -1.63
CHD1-207ENST00000511628 IER2Q9BTL4 223 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 CLDND1Q9NY35 253 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 FBLN5Q9UBX5 448 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 KLF4O43474 513 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 TRIM13O60858 407 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 DGKIO75912 1065 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 CYP2C8P10632 490 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 ATF2P15336 505 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 IGFBP6P24592 240 aaPredicted RBP4.83□□□□□ -1.64
CHD1-207ENST00000511628 KCNC1P48547 511 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 GFRA1P56159 465 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 CACNB2Q08289 660 aaPredicted RBP4.83□□□□□ -1.64
CHD1-207ENST00000511628 LSAMPQ13449 338 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 SERINC3Q13530 473 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 ACBD5Q5T8D3 534 aaPredicted RBP4.83□□□□□ -1.64
CHD1-207ENST00000511628 GIMAP6Q6P9H5 292 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 CD300LDQ6UXZ3 194 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 ETV3LQ6ZN32 361 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 TTLL7Q6ZT98 887 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 B3GNT8Q7Z7M8 397 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 SMARCC2Q8TAQ2 1214 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 ZBTB8AQ96BR9 441 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 EPB41L4AQ9HCS5 686 aaPredicted RBP4.83□□□□□ -1.64
CHD1-207ENST00000511628 USP40Q9NVE5 1235 aa4.83□□□□□ -1.64
CHD1-207ENST00000511628 SHROOM4Q9ULL8 1493 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 PRODHO43272 600 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 MAFKO60675 156 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 SCG5P05408 212 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 HOXA5P20719 270 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 RAB33AQ14088 237 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 NFIXQ14938 502 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 LRRC47Q8N1G4 583 aaKnown RBP4.82□□□□□ -1.64
CHD1-207ENST00000511628 RCBTB1Q8NDN9 531 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 FEZF2Q8TBJ5 459 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 SGSM3Q96HU1 749 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 AARSD1Q9BTE6 412 aaKnown RBP4.82□□□□□ -1.64
CHD1-207ENST00000511628 HIRIP3Q9BW71 556 aaPredicted RBP4.82□□□□□ -1.64
CHD1-207ENST00000511628 OSBPL2Q9H1P3 480 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 TMEFF2Q9UIK5 374 aaPredicted RBP4.82□□□□□ -1.64
CHD1-207ENST00000511628 PALD1Q9ULE6 856 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 PLA2G2DQ9UNK4 145 aa4.82□□□□□ -1.64
CHD1-207ENST00000511628 TRAV20A0A0B4J274 112 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 A0A1W2PQU0 124 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 H7BY64 318 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 KRIT1O00522 736 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 HGSO14964 777 aaPredicted RBP4.81□□□□□ -1.64
CHD1-207ENST00000511628 APPP05067 770 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 GRIA2P42262 883 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 NKX3-2P78367 333 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 MAP4K2Q12851 820 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 IFRD2Q12894 506 aaPredicted RBP4.81□□□□□ -1.64
CHD1-207ENST00000511628 SMAD4Q13485 552 aaKnown RBP4.81□□□□□ -1.64
CHD1-207ENST00000511628 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 RIOX2Q8IUF8 465 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 CCDC103Q8IW40 242 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 SYT8Q8NBV8 401 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 KREMEN2Q8NCW0 462 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 FNIP1Q8TF40 1166 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 CPA5Q8WXQ8 436 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 RELTQ969Z4 430 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 KCNC2Q96PR1 638 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 CDC6Q99741 560 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 NGRNQ9NPE2 291 aaKnown RBP4.81□□□□□ -1.64
CHD1-207ENST00000511628 NTMQ9P121 344 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 RAPGEFL1Q9UHV5 662 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 PCDHB4Q9Y5E5 795 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 ADAMTS20P59510 1910 aa4.81□□□□□ -1.64
CHD1-207ENST00000511628 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 SGSM2O43147 1006 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 LCP1P13796 627 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 FBLN1P23142 703 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 SLC6A11P48066 632 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 BMS1Q14692 1282 aaKnown RBP4.8□□□□□ -1.64
CHD1-207ENST00000511628 MTERF2Q49AM1 385 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 NSMFQ6X4W1 530 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 ADGRG2Q8IZP9 1017 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 ST13P5Q8NFI4 369 aaPredicted RBP4.8□□□□□ -1.64
CHD1-207ENST00000511628 PHF20Q9BVI0 1012 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 EPB41L1Q9H4G0 881 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 ZSWIM4Q9H7M6 989 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 LUC7LQ9NQ29 371 aaKnown RBP4.8□□□□□ -1.64
CHD1-207ENST00000511628 X6R8D5 127 aa4.8□□□□□ -1.64
CHD1-207ENST00000511628 A0A1B0GTL3 188 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 OTOL1A6NHN0 477 aaPredicted RBP4.79□□□□□ -1.64
CHD1-207ENST00000511628 FFAR3O14843 346 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 PDPK1O15530 556 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 PLA2G1BP04054 148 aaKnown RBP4.79□□□□□ -1.64
CHD1-207ENST00000511628 PABPC1P11940 636 aaKnown RBP4.79□□□□□ -1.64
CHD1-207ENST00000511628 STAT5AP42229 794 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 SARSP49591 514 aaKnown RBP4.79□□□□□ -1.64
CHD1-207ENST00000511628 SLURP1P55000 103 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 GJA9P57773 515 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 SLC35F1Q5T1Q4 408 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 LIPIQ6XZB0 460 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 SAPCD2Q86UD0 394 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 ZNF526Q8TF50 670 aaPredicted RBP4.79□□□□□ -1.64
CHD1-207ENST00000511628 DCAF4Q8WV16 495 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms