RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	RAB11FIP4	Q86YS3	637 aa		13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	TMTC2	Q8N394	836 aa		13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	CTCFL	Q8NI51	663 aa	Predicted RBP	13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	PPP1R13L	Q8WUF5	828 aa		13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	AFG1L	Q8WV93	481 aa		13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	PIBF1	Q8WXW3	757 aa		13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	CCDC136	Q96JN2	1154 aa		13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	RNPC3	Q96LT9	517 aa	Known RBP	13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	NOC4L	Q9BVI4	516 aa	Known RBP	13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	EYS	Q5T1H1	3165 aa		13.95	□□□□□ -0.18
CHFR-208	ENST00000511001	FRMPD4	Q14CM0	1322 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	CCDC69	A6NI79	296 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	KPNA6	O60684	536 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	GH1	P01241	217 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	MMP3	P08254	477 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	POLR2M	P0CAP2	368 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	KIF5B	P33176	963 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	EXOSC10	Q01780	885 aa	Known RBP	13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	PPIG	Q13427	754 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	NBPF20	Q3BBV1	942 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	ADCK5	Q3MIX3	580 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	TSGA10IP	Q3SY00	556 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	NFXL1	Q6ZNB6	911 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	VSIG10L	Q86VR7	867 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	VWCE	Q96DN2	955 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	NEK1	Q96PY6	1258 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	WNT8A	Q9H1J5	351 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	HIPK3	Q9H422	1215 aa		13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	TRMT13	Q9NUP7	481 aa	Known RBP	13.94	□□□□□ -0.18
CHFR-208	ENST00000511001	ACR	P10323	421 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	MYCL	P12524	364 aa	Predicted RBP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	GNAQ	P50148	359 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	SMAD3	P84022	425 aa	Known RBP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	BRDT	Q58F21	947 aa	Predicted RBP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	RASIP1	Q5U651	963 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	RNF20	Q5VTR2	975 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	FCHSD1	Q86WN1	690 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	CMTR1	Q8N1G2	835 aa	Known RBP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	TMEM199	Q8N511	208 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	KAT2B	Q92831	832 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	EMID1	Q96A84	441 aa	Predicted RBP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	RRP36	Q96EU6	259 aa	Known RBP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	ZFP91	Q96JP5	570 aa	Predicted RBP	13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	TCEANC2	Q96MN5	208 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	GUCD1	Q96NT3	240 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	LZTS2	Q9BRK4	669 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	MRVI1	Q9Y6F6	885 aa		13.93	□□□□□ -0.18
CHFR-208	ENST00000511001	MEIS2	O14770	477 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	CALM1	P0DP23	149 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	CALM2	P0DP24	149 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	CALM3	P0DP25	149 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	CYP2C9	P11712	490 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	CCL23	P55773	120 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	MRPS9	P82933	396 aa	Known RBP	13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	SP2	Q02086	613 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	NFRKB	Q6P4R8	1299 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	TMTC3	Q6ZXV5	915 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	FANCB	Q8NB91	859 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	KCNB2	Q92953	911 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	FAM161B	Q96MY7	647 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	IL23A	Q9NPF7	189 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	SLC12A7	Q9Y666	1083 aa		13.92	□□□□□ -0.18
CHFR-208	ENST00000511001	hCG_1642624	A0A1W2PR95	340 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	HOXD8	P13378	290 aa	Predicted RBP	13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	CCND2	P30279	289 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	PTPN11	Q06124	597 aa	Predicted RBP	13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	FAM47C	Q5HY64	1035 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	APOA5	Q6Q788	366 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	USP17L6P	Q6QN14	398 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	ZNF365	Q70YC5	407 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	DHX32	Q7L7V1	743 aa	Known RBP	13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	MICU3	Q86XE3	530 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	TTYH1	Q9H313	450 aa	Predicted RBP	13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	BRPF3	Q9ULD4	1205 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	KAT6A	Q92794	2004 aa		13.91	□□□□□ -0.18
CHFR-208	ENST00000511001	PTPRS	Q13332	1948 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	CDH23	Q9H251	3354 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	PIK3CD	O00329	1044 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	SUPT20HL2	P0C7V6	817 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	UBA1	P22314	1058 aa	Known RBP	13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	SEMA3F	Q13275	785 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	LAMC2	Q13753	1193 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	CELF3	Q5SZQ8	465 aa	Known RBP	13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	ZNF697	Q5TEC3	545 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	MYSM1	Q5VVJ2	828 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	KCNV1	Q6PIU1	500 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	SESTD1	Q86VW0	696 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	DHX37	Q8IY37	1157 aa	Known RBP	13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	CCDC82	Q8N4S0	544 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	PPTC7	Q8NI37	304 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	HERVK_113	Q902F9	699 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	SCLY	Q96I15	445 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	CTAGE1	Q96RT6	745 aa		13.9	□□□□□ -0.18
CHFR-208	ENST00000511001	SEMA6B	Q9H3T3	888 aa		13.9	□□□□□ -0.18

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