RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 STXBP2Q15833 593 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 TMEM67Q5HYA8 995 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 ARHGEF16Q5VV41 709 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 AFG1LQ8WV93 481 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 CXXC1Q9P0U4 656 aaPredicted RBP18.84■□□□□ 0.61
LMNA-222ENST00000508500 DDX41Q9UJV9 622 aaKnown RBP18.84■□□□□ 0.61
LMNA-222ENST00000508500 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 MMP3P08254 477 aa18.83■□□□□ 0.6
LMNA-222ENST00000508500 NECTIN1Q15223 517 aa18.83■□□□□ 0.6
LMNA-222ENST00000508500 IL31RAQ8NI17 732 aa18.83■□□□□ 0.6
LMNA-222ENST00000508500 SCLYQ96I15 445 aa18.83■□□□□ 0.6
LMNA-222ENST00000508500 PDCD2LQ9BRP1 358 aa18.83■□□□□ 0.6
LMNA-222ENST00000508500 MYL10Q9BUA6 226 aa18.83■□□□□ 0.6
LMNA-222ENST00000508500 REV3LO60673 3130 aa18.83■□□□□ 0.6
LMNA-222ENST00000508500 SLC27A2O14975 620 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
LMNA-222ENST00000508500 GH1P01241 217 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 DNAJB2P25686 324 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 PBX2P40425 430 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 GRIN2CQ14957 1233 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 PSRC1Q6PGN9 363 aaPredicted RBP18.82■□□□□ 0.6
LMNA-222ENST00000508500 HERVK_113Q902F9 699 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 KAT2BQ92831 832 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 ZFP91Q96JP5 570 aaPredicted RBP18.82■□□□□ 0.6
LMNA-222ENST00000508500 MAP3K20Q9NYL2 800 aaKnown RBP18.82■□□□□ 0.6
LMNA-222ENST00000508500 TTC28Q96AY4 2481 aa18.82■□□□□ 0.6
LMNA-222ENST00000508500 PNMA6FA0A0J9YX94 578 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 PRC1O43663 620 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 KPNA6O60684 536 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 SART3Q15020 963 aaKnown RBP18.81■□□□□ 0.6
LMNA-222ENST00000508500 PGM5Q15124 567 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 NFRKBQ6P4R8 1299 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 CATIPQ7Z7H3 387 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 ZNF654Q8IZM8 581 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 CTAGE1Q96RT6 745 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
LMNA-222ENST00000508500 RBAK-RBAKDNI3L0D1 243 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 SH2B2O14492 632 aaPredicted RBP18.8■□□□□ 0.6
LMNA-222ENST00000508500 FGBP02675 491 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 MYCLP12524 364 aaPredicted RBP18.8■□□□□ 0.6
LMNA-222ENST00000508500 BRDTQ58F21 947 aaPredicted RBP18.8■□□□□ 0.6
LMNA-222ENST00000508500 FAM47CQ5HY64 1035 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 CREB3L3Q68CJ9 461 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 VSIG10LQ86VR7 867 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 SAMD3Q8N6K7 520 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 USP38Q8NB14 1042 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 PIBF1Q8WXW3 757 aa18.8■□□□□ 0.6
LMNA-222ENST00000508500 GPKOWQ92917 476 aaPredicted RBP eCLIP18.8■□□□□ 0.6
LMNA-222ENST00000508500 SUPT20HL2P0C7V6 817 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 FOSL2P15408 326 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 SP2Q02086 613 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 PTPN11Q06124 597 aaPredicted RBP18.79■□□□□ 0.6
LMNA-222ENST00000508500 BMP2KLQ5H9B9 411 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 OTOP2Q7RTS6 562 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 EMID1Q96A84 441 aaPredicted RBP18.79■□□□□ 0.6
LMNA-222ENST00000508500 MAP3K14Q99558 947 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 BCAS3Q9H6U6 928 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 KAT6AQ92794 2004 aa18.79■□□□□ 0.6
LMNA-222ENST00000508500 GCOM1H8Y6P7 765 aaPredicted RBP18.78■□□□□ 0.6
LMNA-222ENST00000508500 DDAH1O94760 285 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 PLEKHA8P1O95397 391 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 POLR2MP0CAP2 368 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 RXRAP19793 462 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 CENPQQ7L2Z9 268 aaPredicted RBP18.78■□□□□ 0.6
LMNA-222ENST00000508500 FCHSD1Q86WN1 690 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 CMTR1Q8N1G2 835 aaKnown RBP18.78■□□□□ 0.6
LMNA-222ENST00000508500 SRBD1Q8N5C6 995 aaKnown RBP18.78■□□□□ 0.6
LMNA-222ENST00000508500 SPZ1Q9BXG8 430 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 ZNF576Q9H609 170 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 MRVI1Q9Y6F6 885 aa18.78■□□□□ 0.6
LMNA-222ENST00000508500 SORBS3O60504 671 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 MCM5P33992 734 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 MRPS9P82933 396 aaKnown RBP18.77■□□□□ 0.6
LMNA-222ENST00000508500 MYSM1Q5VVJ2 828 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 GDF6Q6KF10 455 aaPredicted RBP18.77■□□□□ 0.6
LMNA-222ENST00000508500 SESTD1Q86VW0 696 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 RAB11FIP4Q86YS3 637 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 TIFAQ96CG3 184 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 TMEM87BQ96K49 555 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 ANO2Q9NQ90 1003 aa18.77■□□□□ 0.6
LMNA-222ENST00000508500 TRANK1O15050 2925 aa18.77■□□□□ 0.59
LMNA-222ENST00000508500 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 HAS3O00219 553 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 IQCF3P0C7M6 154 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 HOXD8P13378 290 aaPredicted RBP18.76■□□□□ 0.59
LMNA-222ENST00000508500 CASTP20810 708 aaKnown RBP18.76■□□□□ 0.59
LMNA-222ENST00000508500 SMARCA1P28370 1054 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 CHMP4BP1P59074 171 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 LAMC2Q13753 1193 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 GPNMBQ14956 572 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 HSDL1Q3SXM5 330 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
LMNA-222ENST00000508500 YBX2Q9Y2T7 364 aaKnown RBP18.76■□□□□ 0.59
LMNA-222ENST00000508500 MEIS2O14770 477 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 ZNF286BP0CG31 522 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 LIFRP42702 1097 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 TRAF1Q13077 416 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 SEMA3FQ13275 785 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms