RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 B4E1Z4 1266 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 HRO43593 1189 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 PPP1R11O60927 126 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 FGBP02675 491 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 MYL3P08590 195 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 GSPT1P15170 499 aaKnown RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 PSEN1P49768 467 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 PDE4DQ08499 809 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 GPNMBQ14956 572 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 SEC23AQ15436 765 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 CDC37Q16543 378 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 QRICH1Q2TAL8 776 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 USH1GQ495M9 461 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 GPATCH4Q5T3I0 446 aaKnown RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 TRAF7Q6Q0C0 670 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 OTOP2Q7RTS6 562 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 STAG2Q8N3U4 1231 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 TAAR1Q96RJ0 339 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 ZSCAN10Q96SZ4 725 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 MTG1Q9BT17 334 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 DSCC1Q9BVC3 393 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 SEZ6LQ9BYH1 1024 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 NKX2-4Q9H2Z4 354 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 RNF41Q9H4P4 317 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 PRDM12Q9H4Q4 367 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 PTPRSQ13332 1948 aa7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 PRRC2BQ5JSZ5 2229 aaKnown RBP7.54□□□□□ -1.2
HMGN1P16-201ENST00000508308 TNKSO95271 1327 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 ZEB2O60315 1214 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 TXNP10599 105 aaKnown RBP7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 MYOGP15173 224 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 CPT1AP50416 773 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 RABGGTBP53611 331 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 MFAP1P55081 439 aaKnown RBP7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 ARHGAP1Q07960 439 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 TTLL4Q14679 1199 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 CYB5R4Q7L1T6 521 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 OR6J1Q8NGC5 347 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 SCFD2Q8WU76 684 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 KAT2BQ92831 832 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 MTMR8Q96EF0 704 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 DIAPH3Q9NSV4 1193 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 TANC1Q9C0D5 1861 aa7.53□□□□□ -1.2
HMGN1P16-201ENST00000508308 MYH7BA7E2Y1 1941 aa7.52□□□□□ -1.2
HMGN1P16-201ENST00000508308 NKRFO15226 690 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 GHRHRQ02643 423 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 PTH1RQ03431 593 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 COL9A3Q14050 684 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 PPP2R5BQ15173 497 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 LY6KQ17RY6 165 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 TCTN1Q2MV58 587 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 ASPRV1Q53RT3 343 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 NFRKBQ6P4R8 1299 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 IQCA1Q86XH1 822 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 AFG1LQ8WV93 481 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 DHX38Q92620 1227 aaKnown RBP7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 MAF1Q9H063 256 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 KAT14Q9H8E8 782 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 VAT1LQ9HCJ6 419 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 MAD2L2Q9UI95 211 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 PNMA2Q9UL42 364 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 SLC4A7Q9Y6M7 1214 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 ABCB11O95342 1321 aa7.52□□□□□ -1.21
HMGN1P16-201ENST00000508308 BRWD1Q9NSI6 2320 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 PALM3A6NDB9 673 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 HIP1O00291 1037 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 CYTH3O43739 400 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 KPNA6O60684 536 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 MMP3P08254 477 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 PARP1P09874 1014 aaKnown RBP7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 IQCF3P0C7M6 154 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 SUPT20HL2P0C7V6 817 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 NT5C2P49902 561 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 HSD17B4P51659 736 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 HIC1Q14526 733 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 RAB30Q15771 203 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 IMMTQ16891 758 aaKnown RBP7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 CCDC178Q5BJE1 867 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 TTC22Q5TAA0 569 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 GDF6Q6KF10 455 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 SEPT14Q6ZU15 432 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 STOX1Q6ZVD7 989 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 SPRED2Q7Z698 418 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 DEFB128Q7Z7B8 93 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 FBXO11Q86XK2 927 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 RPUSD2Q8IZ73 545 aaKnown RBP7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 IL31RAQ8NI17 732 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 NSUN6Q8TEA1 469 aaKnown RBP7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 RMDN3Q96TC7 470 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 KRT23Q9C075 422 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 BCAS3Q9H6U6 928 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 PXMP2Q9NR77 195 aa7.51□□□□□ -1.21
HMGN1P16-201ENST00000508308 MSRAQ9UJ68 235 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms