RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 ABCB5Q2M3G0 1257 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 PRR23CQ6ZRP0 262 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 OSTM1Q86WC4 334 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 KSR1Q8IVT5 923 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 CMIPQ8IY22 773 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 CHST14Q8NCH0 376 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 CLRN3Q8NCR9 226 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 KCNJ15Q99712 375 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 MS4A5Q9H3V2 200 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 LRRC4CQ9HCJ2 640 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 ATP13A1Q9HD20 1204 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 OXSMQ9NWU1 459 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 ERVK13-1Q9NX77 482 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 KCNK3O14649 394 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 AMY2AP04746 511 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 ZBTB48P10074 688 aaPredicted RBP5.41□□□□□ -1.54
USP53-204ENST00000507906 AMY2BP19961 511 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 GRIK1P39086 918 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 IARSP41252 1262 aaKnown RBP5.41□□□□□ -1.54
USP53-204ENST00000507906 LSSP48449 732 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 JAM2P57087 298 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 NFIAQ12857 509 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 LAPTM5Q13571 262 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 KIZQ2M2Z5 673 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 MAP9Q49MG5 647 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 ATP13A4Q4VNC1 1196 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 IQCEQ6IPM2 695 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 C16orf59Q7L2K0 433 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 FBXW5Q969U6 566 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 ALG1Q9BT22 464 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 CDH19Q9H159 772 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 TRIT1Q9H3H1 467 aaKnown RBP5.41□□□□□ -1.54
USP53-204ENST00000507906 SMURF1Q9HCE7 757 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 AASDHPPTQ9NRN7 309 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 FBLN5Q9UBX5 448 aa5.41□□□□□ -1.54
USP53-204ENST00000507906 NOB1Q9ULX3 412 aaKnown RBP5.41□□□□□ -1.54
USP53-204ENST00000507906 APOBEC2Q9Y235 224 aaKnown RBP5.41□□□□□ -1.54
USP53-204ENST00000507906 LCHNA4D1U4 455 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 WTIPA6NIX2 430 aaPredicted RBP5.4□□□□□ -1.54
USP53-204ENST00000507906 DYRK3O43781 588 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 CEACAM5P06731 702 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 COL6A2P12110 1019 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 PDE6AP16499 860 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 GRK2P25098 689 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 GRK3P35626 688 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 PIN1Q13526 163 aaPredicted RBP5.4□□□□□ -1.54
USP53-204ENST00000507906 PCBP2Q15366 365 aaKnown RBP eCLIP5.4□□□□□ -1.54
USP53-204ENST00000507906 NKAPLQ5M9Q1 402 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 DUSP27Q5VZP5 1158 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 RNF111Q6ZNA4 994 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 CREG2Q8IUH2 290 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 CHPFQ8IZ52 775 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 TTC8Q8TAM2 541 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 SHKBP1Q8TBC3 707 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 CHMP4CQ96CF2 233 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 G6PC3Q9BUM1 346 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 RHOBTB2Q9BYZ6 727 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 DUSP13Q9UII6 198 aa5.4□□□□□ -1.54
USP53-204ENST00000507906 TIMM13Q9Y5L4 95 aaPredicted RBP5.4□□□□□ -1.54
USP53-204ENST00000507906 PITPNM2Q9BZ72 1349 aa5.4□□□□□ -1.55
USP53-204ENST00000507906 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 K7ESF4 209 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 NKRFO15226 690 aaKnown RBP eCLIP5.39□□□□□ -1.55
USP53-204ENST00000507906 PRC1O43663 620 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 GAS7O60861 476 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 PEX14O75381 377 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 ABLIM3O94929 683 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 FBXO21O94952 628 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 MT-CO1P00395 513 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 NAT1P18440 290 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 FPR2P25090 351 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 RPL10P27635 214 aaKnown RBP5.39□□□□□ -1.55
USP53-204ENST00000507906 GNALP38405 381 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 LACTBP83111 547 aaPredicted RBP5.39□□□□□ -1.55
USP53-204ENST00000507906 CYP27A1Q02318 531 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 LSAMPQ13449 338 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 ODF1Q14990 250 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 SEC23AQ15436 765 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 PRSS36Q5K4E3 855 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 IQSEC1Q6DN90 963 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 OTOP1Q7RTM1 612 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 THAP5Q7Z6K1 395 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 CCDC146Q8IYE0 955 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 SH3RF2Q8TEC5 729 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 FUBP3Q96I24 572 aaKnown RBP eCLIP5.39□□□□□ -1.55
USP53-204ENST00000507906 MKNK2Q9HBH9 465 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 CABP5Q9NP86 173 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 CATSPERZQ9NTU4 200 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 BTG4Q9NY30 223 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 CLDND1Q9NY35 253 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 GULP1Q9UBP9 304 aa5.39□□□□□ -1.55
USP53-204ENST00000507906 SSU72P8A0A1W2PR75 194 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
USP53-204ENST00000507906 FAM47E-STBD1D6RA91 191 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PCDHGA12O60330 932 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 SLC9A1P19634 815 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 LTKP29376 864 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 CD96P40200 585 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 EGR3Q06889 387 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 SART3Q15020 963 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms