RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 H3BQV1 296 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 M0R2N6 131 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 SNAI1O95863 264 aaPredicted RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 KRT2P35908 639 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 TRAF1Q13077 416 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 FOXD4L6Q3SYB3 417 aaPredicted RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 IFFO2Q5TF58 517 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ANO1Q5XXA6 986 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 FAM173BQ6P4H8 233 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 FOXD4L3Q6VB84 417 aaPredicted RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PIK3AP1Q6ZUJ8 805 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 TRPV1Q8NER1 839 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 CCDC12Q8WUD4 166 aaPredicted RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 SOCS4Q8WXH5 440 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 CHAMP1Q96JM3 812 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PDCD2LQ9BRP1 358 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ANO3Q9BYT9 981 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 MCM3APO60318 1980 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 LCTP09848 1927 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 SPDYE3A6NKU9 549 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 hCG_1984214I3L0E3 225 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 STK25O00506 426 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 NR3C2P08235 984 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 HOXC6P09630 235 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 XBP1P17861 261 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 GNA11P29992 359 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 MRPS9P82933 396 aaKnown RBP10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 GHRHRQ02643 423 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 NBR1Q14596 966 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 INF2Q27J81 1249 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 ARMCX2Q7L311 632 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 FBXO16Q8IX29 292 aaPredicted RBP10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 ZNF713Q8N859 430 aaPredicted RBP10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 NSUN6Q8TEA1 469 aaKnown RBP10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 TNFRSF25Q93038 417 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 APBA2Q99767 749 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 TINF2Q9BSI4 451 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 BCAS3Q9H6U6 928 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 MTMR6Q9Y217 621 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 STK24Q9Y6E0 443 aa10.1□□□□□ -0.79
SCAMP1-202ENST00000506858 CCND3P30281 292 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 CACNB2Q08289 660 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 PGM5Q15124 567 aa10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 MTFR1Q15390 333 aa10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 GJC2Q5T442 439 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 COL13A1Q5TAT6 717 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 SEPT14Q6ZU15 432 aa10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 TBCKQ8TEA7 893 aa10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 GJA10Q969M2 543 aa10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
SCAMP1-202ENST00000506858 CCDC194A0A1B0GVG4 234 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 RGS20O76081 388 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 TDP2O95551 362 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 INHAP05111 366 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 XRCC5P13010 732 aaKnown RBP10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 GRK4P32298 578 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 ARHGAP4P98171 946 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 PDE4DQ08499 809 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 IRF5Q13568 498 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 ARHGEF6Q15052 776 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 SAFBQ15424 915 aaKnown RBP eCLIP10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 VSIG10LQ86VR7 867 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 BICD2Q8TD16 824 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 MCOLN1Q9GZU1 580 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 PRDM10Q9NQV6 1147 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 DAXXQ9UER7 740 aaPredicted RBP10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 ADD3Q9UEY8 706 aaKnown RBP10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 ZHX1Q9UKY1 873 aaPredicted RBP10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 TELO2Q9Y4R8 837 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 RPTORQ8N122 1335 aa10.08□□□□□ -0.8
SCAMP1-202ENST00000506858 FAM86B1E9PN63 330 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ADCY6O43306 1168 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 STX6O43752 255 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ARIH2O95376 493 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 GNRH1P01148 92 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 IGHA2P01877 340 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 FAM86B2P0C5J1 330 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ITGB5P18084 799 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 EDNRBP24530 442 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 CNGA1P29973 690 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ADCYAP1R1P41586 468 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 GNL2Q13823 731 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 DNERQ8NFT8 737 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 COPS5Q92905 334 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 WDR11Q9BZH6 1224 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 KATNBL1Q9H079 304 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 SLC5A4Q9NY91 659 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 DIS3Q9Y2L1 958 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ZDHHC9Q9Y397 364 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms