RNA–Protein interactions for RNA: ENST00000506320.1

SIKE1-209, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-209ENST00000506320 MRVI1Q9Y6F6 885 aa23.18■■□□□ 1.3
SIKE1-209ENST00000506320 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.17■■□□□ 1.3
SIKE1-209ENST00000506320 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.17■■□□□ 1.3
SIKE1-209ENST00000506320 MMP3P08254 477 aa23.17■■□□□ 1.3
SIKE1-209ENST00000506320 HOXA13P31271 388 aaPredicted RBP23.17■■□□□ 1.3
SIKE1-209ENST00000506320 LY6KQ17RY6 165 aa23.17■■□□□ 1.3
SIKE1-209ENST00000506320 NBPF20Q3BBV1 942 aa23.17■■□□□ 1.3
SIKE1-209ENST00000506320 TMEM240Q5SV17 173 aa23.17■■□□□ 1.3
SIKE1-209ENST00000506320 VSIG10LQ86VR7 867 aa23.17■■□□□ 1.3
SIKE1-209ENST00000506320 MTIF3Q9H2K0 278 aaKnown RBP23.17■■□□□ 1.3
SIKE1-209ENST00000506320 DDX41Q9UJV9 622 aaKnown RBP23.17■■□□□ 1.3
SIKE1-209ENST00000506320 CASTP20810 708 aaKnown RBP23.16■■□□□ 1.3
SIKE1-209ENST00000506320 CCND2P30279 289 aa23.16■■□□□ 1.3
SIKE1-209ENST00000506320 RASIP1Q5U651 963 aa23.16■■□□□ 1.3
SIKE1-209ENST00000506320 C16orf59Q7L2K0 433 aa23.16■■□□□ 1.3
SIKE1-209ENST00000506320 AFG1LQ8WV93 481 aa23.16■■□□□ 1.3
SIKE1-209ENST00000506320 MYL10Q9BUA6 226 aa23.16■■□□□ 1.3
SIKE1-209ENST00000506320 FRMPD4Q14CM0 1322 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 STAM2O75886 525 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 TGFB3P10600 412 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 MYCLP12524 364 aaPredicted RBP23.15■■□□□ 1.3
SIKE1-209ENST00000506320 LAMC2Q13753 1193 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 DGKDQ16760 1214 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 FAM47CQ5HY64 1035 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 SGMS1Q86VZ5 419 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 TRMT13Q9NUP7 481 aaKnown RBP23.15■■□□□ 1.3
SIKE1-209ENST00000506320 SLC12A7Q9Y666 1083 aa23.15■■□□□ 1.3
SIKE1-209ENST00000506320 UMODL1Q5DID0 1318 aa23.14■■□□□ 1.3
SIKE1-209ENST00000506320 PFKMP08237 780 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 ZNF365Q70YC5 407 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 SESTD1Q86VW0 696 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 RPUSD2Q8IZ73 545 aaKnown RBP23.14■■□□□ 1.29
SIKE1-209ENST00000506320 PPTC7Q8NI37 304 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 CCDC136Q96JN2 1154 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 GUCD1Q96NT3 240 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 KATNAL1Q9BW62 490 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 WNT8AQ9H1J5 351 aa23.14■■□□□ 1.29
SIKE1-209ENST00000506320 PITPNM1O00562 1244 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 RGS20O76081 388 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 KRT32Q14532 448 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 TSGA10IPQ3SY00 556 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 FCHSD1Q86WN1 690 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 SKAP1Q86WV1 359 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 DHX37Q8IY37 1157 aaKnown RBP23.13■■□□□ 1.29
SIKE1-209ENST00000506320 HERVK_113Q902F9 699 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 CUL5Q93034 780 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 NEK1Q96PY6 1258 aa23.13■■□□□ 1.29
SIKE1-209ENST00000506320 LAMA2P24043 3122 aaKnown RBP23.13■■□□□ 1.29
SIKE1-209ENST00000506320 PIK3CDO00329 1044 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 FGBP02675 491 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 ACRP10323 421 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 CCL23P55773 120 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 GNPTABQ3T906 1256 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 SYNE3Q6ZMZ3 975 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 IL31RAQ8NI17 732 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 NOD1Q9Y239 953 aa23.12■■□□□ 1.29
SIKE1-209ENST00000506320 PLEKHA8P1O95397 391 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 CYP2C9P11712 490 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 HOXD8P13378 290 aaPredicted RBP23.11■■□□□ 1.29
SIKE1-209ENST00000506320 RFC2P35250 354 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 XRRA1Q6P2D8 792 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 SRBD1Q8N5C6 995 aaKnown RBP23.11■■□□□ 1.29
SIKE1-209ENST00000506320 CCDC155Q8N6L0 562 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 FANCBQ8NB91 859 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 SMARCC2Q8TAQ2 1214 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 PIBF1Q8WXW3 757 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 SEMA6BQ9H3T3 888 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 SCN5AQ14524 2016 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 GBF1Q92538 1859 aa23.11■■□□□ 1.29
SIKE1-209ENST00000506320 HMGB1P09429 215 aaKnown RBP23.1■■□□□ 1.29
SIKE1-209ENST00000506320 DNAJB2P25686 324 aa23.1■■□□□ 1.29
SIKE1-209ENST00000506320 BFSP2Q13515 415 aa23.1■■□□□ 1.29
SIKE1-209ENST00000506320 COL9A3Q14050 684 aaPredicted RBP23.1■■□□□ 1.29
SIKE1-209ENST00000506320 CELF3Q5SZQ8 465 aaKnown RBP23.1■■□□□ 1.29
SIKE1-209ENST00000506320 MYSM1Q5VVJ2 828 aa23.1■■□□□ 1.29
SIKE1-209ENST00000506320 KAT2BQ92831 832 aa23.1■■□□□ 1.29
SIKE1-209ENST00000506320 RBM28Q9NW13 759 aaKnown RBP23.1■■□□□ 1.29
SIKE1-209ENST00000506320 PPFIA4O75335 1185 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 GGPS1O95749 300 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 F2P00734 622 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 UBA1P22314 1058 aaKnown RBP23.09■■□□□ 1.29
SIKE1-209ENST00000506320 PTGISQ16647 500 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 APOA5Q6Q788 366 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 TMTC3Q6ZXV5 915 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 DHX32Q7L7V1 743 aaKnown RBP23.09■■□□□ 1.29
SIKE1-209ENST00000506320 MICU3Q86XE3 530 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 RETREG2Q8NC44 543 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 CAGE1Q8TC20 777 aa23.09■■□□□ 1.29
SIKE1-209ENST00000506320 INPP4AQ96PE3 977 aaPredicted RBP23.09■■□□□ 1.29
SIKE1-209ENST00000506320 TTYH1Q9H313 450 aaPredicted RBP23.09■■□□□ 1.29
SIKE1-209ENST00000506320 TRIP12Q14669 1992 aaPredicted RBP23.09■■□□□ 1.29
SIKE1-209ENST00000506320 RXRAP19793 462 aa23.08■■□□□ 1.29
SIKE1-209ENST00000506320 ICAM3P32942 547 aa23.08■■□□□ 1.29
SIKE1-209ENST00000506320 PCNX4Q63HM2 1172 aa23.08■■□□□ 1.29
SIKE1-209ENST00000506320 TEX2Q8IWB9 1127 aa23.08■■□□□ 1.29
SIKE1-209ENST00000506320 SPATA33Q96N06 139 aa23.08■■□□□ 1.29
SIKE1-209ENST00000506320 CDX2Q99626 313 aaPredicted RBP23.08■■□□□ 1.29
SIKE1-209ENST00000506320 LRRC2Q9BYS8 371 aa23.08■■□□□ 1.29
SIKE1-209ENST00000506320 GTF2IRD1Q9UHL9 959 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms