RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 CCDC194A0A1B0GVG4 234 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 VPS37CA5D8V6 355 aaPredicted RBP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 B4DLN1 442 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 STX6O43752 255 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 SREBF1P36956 1147 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 ARHGAP4P98171 946 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 CACNB2Q08289 660 aaPredicted RBP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 PKP1Q13835 747 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 NONOQ15233 471 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 STXBP2Q15833 593 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 PKN2Q16513 984 aaKnown RBP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 INF2Q27J81 1249 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 PCNX4Q63HM2 1172 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 FBXO46Q6PJ61 603 aaPredicted RBP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 TRPV1Q8NER1 839 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 TBCKQ8TEA7 893 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 CRYGNQ8WXF5 182 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 KATNBL1Q9H079 304 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
TRIM6-208ENST00000506134 MTMR6Q9Y217 621 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 MCM3APO60318 1980 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 SYNGAP1Q96PV0 1343 aa11.22□□□□□ -0.61
TRIM6-208ENST00000506134 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 EIF3JO75822 258 aaKnown RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 RGS20O76081 388 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 HMGCRP04035 888 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 CYP3A4P08684 503 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 ZNF865P0CJ78 1059 aaPredicted RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 CCND2P30279 289 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 ACVR2BQ13705 512 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 GNL2Q13823 731 aaKnown RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 TMEM63BQ5T3F8 832 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 SEPT14Q6ZU15 432 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 FERMT3Q86UX7 667 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 FBXO16Q8IX29 292 aaPredicted RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 CYP2W1Q8TAV3 490 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 FOXD4L4Q8WXT5 416 aaPredicted RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
TRIM6-208ENST00000506134 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 EHMT1Q9H9B1 1298 aa11.21□□□□□ -0.61
TRIM6-208ENST00000506134 MYH7BA7E2Y1 1941 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 MYCP01106 439 aaPredicted RBP11.2□□□□□ -0.62
TRIM6-208ENST00000506134 INHAP05111 366 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 ITGB5P18084 799 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 ATP2B1P20020 1258 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 CCND3P30281 292 aaPredicted RBP11.2□□□□□ -0.62
TRIM6-208ENST00000506134 ZNF76P36508 570 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 USP11P51784 963 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 XRRA1Q6P2D8 792 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 NOSTRINQ8IVI9 506 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 MXRA8Q9BRK3 442 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 WDR11Q9BZH6 1224 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 ZHX1Q9UKY1 873 aaPredicted RBP11.2□□□□□ -0.62
TRIM6-208ENST00000506134 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 UBIAD1Q9Y5Z9 338 aa11.2□□□□□ -0.62
TRIM6-208ENST00000506134 FAM86B1E9PN63 330 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 MEIS1O00470 390 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 WNT7AO00755 349 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 FAM86B2P0C5J1 330 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 CYBAP13498 195 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 CIITAP33076 1130 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 DDIT3P35638 169 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 TOB1P50616 345 aaPredicted RBP11.19□□□□□ -0.62
TRIM6-208ENST00000506134 LETM2Q2VYF4 491 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 COL13A1Q5TAT6 717 aaPredicted RBP11.19□□□□□ -0.62
TRIM6-208ENST00000506134 MAP3K21Q5TCX8 1036 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 NEK8Q86SG6 692 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
TRIM6-208ENST00000506134 UIMC1Q96RL1 719 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 VTA1Q9NP79 307 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 JADE2Q9NQC1 790 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
TRIM6-208ENST00000506134 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-208ENST00000506134 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
TRIM6-208ENST00000506134 SPATA31C2B4DYI2 1134 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 STAM2O75886 525 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 TDP2O95551 362 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 ZSCAN22P10073 491 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-208ENST00000506134 ARP10275 920 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 PTGS1P23219 599 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 CNGA1P29973 690 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 SP2Q02086 613 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 RESTQ13127 1097 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 SEMA3FQ13275 785 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 MTFR1Q15390 333 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 CEP55Q53EZ4 464 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 FAM173BQ6P4H8 233 aa11.18□□□□□ -0.62
TRIM6-208ENST00000506134 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms