RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 PDIA5Q14554 519 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 ECM1Q16610 540 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 TTBK2Q6IQ55 1244 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 C15orf52Q6ZUT6 534 aaKnown RBP8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 CCDC84Q86UT8 332 aaPredicted RBP8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 ADGRF4Q8IZF3 695 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 TBC1D16Q8TBP0 767 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 TSGA10Q9BZW7 698 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 JMJD4Q9H9V9 463 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 SIK3Q9Y2K2 1263 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 CAPN6Q9Y6Q1 641 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 COL24A1Q17RW2 1714 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 MPHOSPH10O00566 681 aaKnown RBP8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 FGFR1OPO95684 399 aaKnown RBP8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 MCM3P25205 808 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 MRPS25P82663 173 aaKnown RBP8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 CDK17Q00537 523 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 RAD51AP2Q09MP3 1159 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 MAN2A1Q16706 1144 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 ASPRV1Q53RT3 343 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 COBLL1Q53SF7 1204 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 CACNA2D4Q7Z3S7 1137 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 GUF1Q8N442 669 aaKnown RBP8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 TRIM58Q8NG06 486 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM163AQ96GL9 167 aaPredicted RBP8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 RBM17Q96I25 401 aaKnown RBP8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 ACBD3Q9H3P7 528 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 DDX25Q9UHL0 483 aaKnown RBP8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 JRKLQ9Y4A0 524 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 DAGLAQ9Y4D2 1042 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 SBF2Q86WG5 1849 aa8.46□□□□□ -1.06
PPARGC1A-204ENST00000506055 ANO9A1A5B4 782 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 TRAF5O00463 557 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 PPP1R11O60927 126 aaPredicted RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 TACC1O75410 805 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 TTLL1O95922 423 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 SERPINB2P05120 415 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 SLURP2P0DP57 97 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 MYBL2P10244 700 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 NAP1L1P55209 391 aaKnown RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 GFPT1Q06210 699 aaPredicted RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 ORC2Q13416 577 aaPredicted RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 MAP9Q49MG5 647 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 KCTD1Q719H9 257 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 COG1Q8WTW3 980 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 TBC1D22AQ8WUA7 517 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 RPGRIP1Q96KN7 1286 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 SH2D4AQ9H788 454 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 KANSL2Q9H9L4 492 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 NLRC4Q9NPP4 1024 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 LRRC4BQ9NT99 713 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 PSD3Q9NYI0 1048 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 PCDHA12Q9UN75 941 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 MYH1P12882 1939 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 PNMA6FA0A0J9YX94 578 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 TARSL2A2RTX5 802 aaKnown RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 HNRNPH3P31942 346 aaKnown RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 NOVP48745 357 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 RASSF7Q02833 373 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 LRRC63Q05C16 580 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 NFRKBQ6P4R8 1299 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 CREG2Q8IUH2 290 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 MSL3Q8N5Y2 521 aaKnown RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM71BQ8TC56 605 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 HDAC7Q8WUI4 952 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 RIN2Q8WYP3 895 aaPredicted RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 HAS1Q92839 578 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 TSG101Q99816 390 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 MXD3Q9BW11 206 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM204AQ9H8W3 233 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 PSTPIP2Q9H939 334 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 RIC8AQ9NPQ8 531 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 DDX4Q9NQI0 724 aaKnown RBP8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 PANK4Q9NVE7 773 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 SMARCAL1Q9NZC9 954 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 SNX12Q9UMY4 172 aa8.45□□□□□ -1.06
PPARGC1A-204ENST00000506055 A0A0U1RQG5 324 aaPredicted RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L10C9JJH3 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 hCG_1984214I3L0E3 225 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 RNF40O75150 1001 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 BBOX1O75936 387 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 ACTN2P35609 894 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 MAGEA1P43355 309 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 SCNN1DP51172 638 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 CACNB1Q02641 598 aaPredicted RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 EZH2Q15910 746 aaKnown RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 CRY2Q49AN0 593 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 CCDC40Q4G0X9 1142 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 TDRD12Q587J7 1177 aaKnown RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 IQCEQ6IPM2 695 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 CCNI2Q6ZMN8 369 aaPredicted RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 LEKR1Q6ZMV7 388 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 LRRC55Q6ZSA7 311 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 NELFCDQ8IXH7 590 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 MYOCDQ8IZQ8 938 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZNF713Q8N859 430 aaPredicted RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 GOLGA5Q8TBA6 731 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms