RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 ARHGEF16Q5VV41 709 aa25.8■■□□□ 1.72
SUDS3P1-201ENST00000505831 OTOP2Q7RTS6 562 aa25.8■■□□□ 1.72
SUDS3P1-201ENST00000505831 NCOA7Q8NI08 942 aa25.8■■□□□ 1.72
SUDS3P1-201ENST00000505831 IGDCC4Q8TDY8 1250 aa25.8■■□□□ 1.72
SUDS3P1-201ENST00000505831 PCDHA1Q9Y5I3 950 aa25.8■■□□□ 1.72
SUDS3P1-201ENST00000505831 MMP3P08254 477 aa25.79■■□□□ 1.72
SUDS3P1-201ENST00000505831 FOSL2P15408 326 aa25.79■■□□□ 1.72
SUDS3P1-201ENST00000505831 ANTXR2P58335 489 aa25.79■■□□□ 1.72
SUDS3P1-201ENST00000505831 PPP1R13LQ8WUF5 828 aa25.79■■□□□ 1.72
SUDS3P1-201ENST00000505831 KAT2BQ92831 832 aa25.79■■□□□ 1.72
SUDS3P1-201ENST00000505831 EMID1Q96A84 441 aaPredicted RBP25.79■■□□□ 1.72
SUDS3P1-201ENST00000505831 RGS20O76081 388 aa25.78■■□□□ 1.72
SUDS3P1-201ENST00000505831 MB21D2Q8IYB1 491 aaPredicted RBP25.78■■□□□ 1.72
SUDS3P1-201ENST00000505831 CTAGE1Q96RT6 745 aa25.78■■□□□ 1.72
SUDS3P1-201ENST00000505831 PIGSQ96S52 555 aa25.78■■□□□ 1.72
SUDS3P1-201ENST00000505831 PDCD2LQ9BRP1 358 aa25.78■■□□□ 1.72
SUDS3P1-201ENST00000505831 MTIF3Q9H2K0 278 aaKnown RBP25.78■■□□□ 1.72
SUDS3P1-201ENST00000505831 KAT6AQ92794 2004 aa25.78■■□□□ 1.72
SUDS3P1-201ENST00000505831 NCOR1O75376 2440 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 PITPNM1O00562 1244 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 PFKMP08237 780 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 WTAPQ15007 396 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 FAM47CQ5HY64 1035 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 CHST3Q7LGC8 479 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 VSIG10LQ86VR7 867 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 SESTD1Q86VW0 696 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 REV3LO60673 3130 aa25.77■■□□□ 1.72
SUDS3P1-201ENST00000505831 ERICH2A1L162 156 aa25.76■■□□□ 1.71
SUDS3P1-201ENST00000505831 RALYLQ86SE5 291 aaKnown RBP25.76■■□□□ 1.71
SUDS3P1-201ENST00000505831 PNMA6FA0A0J9YX94 578 aa25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 IQCF3P0C7M6 154 aa25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 CASTP20810 708 aaKnown RBP25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 TRAF1Q13077 416 aa25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 SART3Q15020 963 aaKnown RBP25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 RAB30Q15771 203 aa25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 MAP3K14Q99558 947 aa25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 RBM8AQ9Y5S9 174 aaKnown RBP25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 SPTBN5Q9NRC6 3674 aaKnown RBP25.75■■□□□ 1.71
SUDS3P1-201ENST00000505831 HOXA13P31271 388 aaPredicted RBP25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 RFC2P35250 354 aa25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 LAMC2Q13753 1193 aa25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 PGM5Q15124 567 aa25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 TMEM67Q5HYA8 995 aa25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 HOMER1Q86YM7 354 aa25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 COL25A1Q9BXS0 654 aaPredicted RBP25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 MSRAQ9UJ68 235 aa25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 YBX2Q9Y2T7 364 aaKnown RBP25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 SLC4A7Q9Y6M7 1214 aa25.74■■□□□ 1.71
SUDS3P1-201ENST00000505831 HOXD8P13378 290 aaPredicted RBP25.73■■□□□ 1.71
SUDS3P1-201ENST00000505831 DGKDQ16760 1214 aa25.73■■□□□ 1.71
SUDS3P1-201ENST00000505831 GDF6Q6KF10 455 aaPredicted RBP25.73■■□□□ 1.71
SUDS3P1-201ENST00000505831 IL31RAQ8NI17 732 aa25.73■■□□□ 1.71
SUDS3P1-201ENST00000505831 MTA3Q9BTC8 594 aa25.73■■□□□ 1.71
SUDS3P1-201ENST00000505831 MRVI1Q9Y6F6 885 aa25.73■■□□□ 1.71
SUDS3P1-201ENST00000505831 HAS3O00219 553 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 PTGISQ16647 500 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 MYSM1Q5VVJ2 828 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 KCNV1Q6PIU1 500 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 DEFB128Q7Z7B8 93 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 CATIPQ7Z7H3 387 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 PPTC7Q8NI37 304 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 LSG1Q9H089 658 aaKnown RBP25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 LY9Q9HBG7 655 aa25.72■■□□□ 1.71
SUDS3P1-201ENST00000505831 PRRC2BQ5JSZ5 2229 aaKnown RBP25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 GCOM1H8Y6P7 765 aaPredicted RBP25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 POLR2MP0CAP2 368 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 TGFB3P10600 412 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 MYCLP12524 364 aaPredicted RBP25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 SMARCA1P28370 1054 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 SP2Q02086 613 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 BFSP2Q13515 415 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 GPNMBQ14956 572 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 DHX37Q8IY37 1157 aaKnown RBP25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 RETREG2Q8NC44 543 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 NKX2-4Q9H2Z4 354 aa25.71■■□□□ 1.71
SUDS3P1-201ENST00000505831 PPFIA4O75335 1185 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 F2P00734 622 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 RABGGTBP53611 331 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 RBL2Q08999 1139 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 COL9A3Q14050 684 aaPredicted RBP25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 CELF3Q5SZQ8 465 aaKnown RBP25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 USP38Q8NB14 1042 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 PRDM12Q9H4Q4 367 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 GTF2IRD1Q9UHL9 959 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 PCDHA11Q9Y5I1 949 aa25.7■■□□□ 1.7
SUDS3P1-201ENST00000505831 FRMPD4Q14CM0 1322 aa25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 PSEN2P49810 448 aa25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 ADGRE1Q14246 886 aa25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 DHX38Q92620 1227 aaKnown RBP25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 SPZ1Q9BXG8 430 aa25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 SLC28A3Q9HAS3 691 aa25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 HDAC6Q9UBN7 1215 aa25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 NOD1Q9Y239 953 aa25.69■■□□□ 1.7
SUDS3P1-201ENST00000505831 ATP2A2P16615 1042 aaKnown RBP25.68■■□□□ 1.7
SUDS3P1-201ENST00000505831 CHMP4BP1P59074 171 aa25.68■■□□□ 1.7
SUDS3P1-201ENST00000505831 NECTIN1Q15223 517 aa25.68■■□□□ 1.7
SUDS3P1-201ENST00000505831 HSDL1Q3SXM5 330 aa25.68■■□□□ 1.7
SUDS3P1-201ENST00000505831 FCHSD1Q86WN1 690 aa25.68■■□□□ 1.7
SUDS3P1-201ENST00000505831 ZNF654Q8IZM8 581 aa25.68■■□□□ 1.7
SUDS3P1-201ENST00000505831 CAGE1Q8TC20 777 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms