RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 THAP9Q9H5L6 903 aa8.8□□□□□ -1
PROM1-206ENST00000505450 RBM12Q9NTZ6 932 aaKnown RBP8.8□□□□□ -1
PROM1-206ENST00000505450 NOVA2Q9UNW9 492 aaKnown RBP8.8□□□□□ -1
PROM1-206ENST00000505450 PLAAQ9Y263 795 aa8.8□□□□□ -1
PROM1-206ENST00000505450 ZSCAN5CA6NGD5 496 aaPredicted RBP8.79□□□□□ -1
PROM1-206ENST00000505450 GNAQP50148 359 aa8.79□□□□□ -1
PROM1-206ENST00000505450 PMS1P54277 932 aaKnown RBP8.79□□□□□ -1
PROM1-206ENST00000505450 NT5DC1Q5TFE4 455 aa8.79□□□□□ -1
PROM1-206ENST00000505450 ANKRD40Q6AI12 368 aa8.79□□□□□ -1
PROM1-206ENST00000505450 OR2W6PQ8NHA6 318 aa8.79□□□□□ -1
PROM1-206ENST00000505450 SLC16A10Q8TF71 515 aa8.79□□□□□ -1
PROM1-206ENST00000505450 DHTKD1Q96HY7 919 aaPredicted RBP8.79□□□□□ -1
PROM1-206ENST00000505450 SAP30BPQ9UHR5 308 aaKnown RBP8.79□□□□□ -1
PROM1-206ENST00000505450 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.79□□□□□ -1
PROM1-206ENST00000505450 MROH5Q6ZUA9 1318 aa8.79□□□□□ -1
PROM1-206ENST00000505450 FAM237AA0A1B0GTK4 181 aa8.79□□□□□ -1
PROM1-206ENST00000505450 A0A1B0GUA9 196 aa8.79□□□□□ -1
PROM1-206ENST00000505450 LRRC53A6NM62 1247 aa8.79□□□□□ -1
PROM1-206ENST00000505450 ADSSL1Q8N142 457 aa8.79□□□□□ -1
PROM1-206ENST00000505450 ANKS4BQ8N8V4 417 aa8.79□□□□□ -1
PROM1-206ENST00000505450 RETREG2Q8NC44 543 aa8.79□□□□□ -1
PROM1-206ENST00000505450 PNMA1Q8ND90 353 aa8.79□□□□□ -1
PROM1-206ENST00000505450 RNPC3Q96LT9 517 aaKnown RBP8.79□□□□□ -1
PROM1-206ENST00000505450 ISCA1Q9BUE6 129 aa8.79□□□□□ -1
PROM1-206ENST00000505450 C6orf50Q9HD87 102 aa8.79□□□□□ -1
PROM1-206ENST00000505450 RCCD1A6NED2 376 aa8.79□□□□□ -1
PROM1-206ENST00000505450 TMEM110-MUSTN1A8MSY1 372 aa8.79□□□□□ -1
PROM1-206ENST00000505450 MPHOSPH10O00566 681 aaKnown RBP8.79□□□□□ -1
PROM1-206ENST00000505450 WNT7AO00755 349 aa8.79□□□□□ -1
PROM1-206ENST00000505450 BUB1BO60566 1050 aaPredicted RBP8.79□□□□□ -1
PROM1-206ENST00000505450 LSP1P33241 339 aa8.79□□□□□ -1
PROM1-206ENST00000505450 IFNAR2P48551 515 aa8.79□□□□□ -1
PROM1-206ENST00000505450 ALX1Q15699 326 aa8.79□□□□□ -1
PROM1-206ENST00000505450 HIBCHQ6NVY1 386 aaPredicted RBP8.79□□□□□ -1
PROM1-206ENST00000505450 SNX29Q8TEQ0 813 aa8.79□□□□□ -1
PROM1-206ENST00000505450 CCT8L2Q96SF2 557 aa8.79□□□□□ -1
PROM1-206ENST00000505450 MAP3K15Q6ZN16 1313 aa8.79□□□□□ -1
PROM1-206ENST00000505450 CHUKO15111 745 aa8.78□□□□□ -1
PROM1-206ENST00000505450 PALMO75781 387 aa8.78□□□□□ -1
PROM1-206ENST00000505450 STK4Q13043 487 aa8.78□□□□□ -1
PROM1-206ENST00000505450 NEDD9Q14511 834 aa8.78□□□□□ -1
PROM1-206ENST00000505450 NONOQ15233 471 aaKnown RBP eCLIP8.78□□□□□ -1
PROM1-206ENST00000505450 SNCBQ16143 134 aa8.78□□□□□ -1
PROM1-206ENST00000505450 ASIC2Q16515 512 aa8.78□□□□□ -1
PROM1-206ENST00000505450 TMTC3Q6ZXV5 915 aa8.78□□□□□ -1
PROM1-206ENST00000505450 PTF1AQ7RTS3 328 aa8.78□□□□□ -1
PROM1-206ENST00000505450 TRMT1LQ7Z2T5 733 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 SRBD1Q8N5C6 995 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 SYT17Q9BSW7 474 aa8.78□□□□□ -1
PROM1-206ENST00000505450 REXO2Q9Y3B8 237 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 KRIT1O00522 736 aa8.78□□□□□ -1
PROM1-206ENST00000505450 PPP1R37O75864 691 aa8.78□□□□□ -1
PROM1-206ENST00000505450 SLC1A4P43007 532 aa8.78□□□□□ -1
PROM1-206ENST00000505450 IFI16Q16666 785 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 HERC4Q5GLZ8 1057 aaPredicted RBP8.78□□□□□ -1
PROM1-206ENST00000505450 GKAP1Q5VSY0 366 aaPredicted RBP8.78□□□□□ -1
PROM1-206ENST00000505450 PAPD7Q5XG87 772 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 PEX26Q7Z412 305 aa8.78□□□□□ -1
PROM1-206ENST00000505450 NLRP14Q86W24 1093 aa8.78□□□□□ -1
PROM1-206ENST00000505450 DCPSQ96C86 337 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 PHF20Q9BVI0 1012 aa8.78□□□□□ -1
PROM1-206ENST00000505450 OR52Z1P0C646 297 aa8.78□□□□□ -1
PROM1-206ENST00000505450 CYP2D6P10635 497 aa8.78□□□□□ -1
PROM1-206ENST00000505450 PEX19P40855 299 aa8.78□□□□□ -1
PROM1-206ENST00000505450 HDLBPQ00341 1268 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 AMPD2Q01433 879 aa8.78□□□□□ -1
PROM1-206ENST00000505450 CACNB1Q02641 598 aaPredicted RBP8.78□□□□□ -1
PROM1-206ENST00000505450 PPP2R5AQ15172 486 aa8.78□□□□□ -1
PROM1-206ENST00000505450 RPAINQ86UA6 219 aa8.78□□□□□ -1
PROM1-206ENST00000505450 KSR1Q8IVT5 923 aa8.78□□□□□ -1
PROM1-206ENST00000505450 TSEN2Q8NCE0 465 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 MGARPQ8TDB4 240 aa8.78□□□□□ -1
PROM1-206ENST00000505450 SAMD15Q9P1V8 674 aa8.78□□□□□ -1
PROM1-206ENST00000505450 XRN1Q8IZH2 1706 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 A0A1W2PQC6 194 aa8.78□□□□□ -1
PROM1-206ENST00000505450 SMCO2A6NFE2 343 aa8.78□□□□□ -1
PROM1-206ENST00000505450 CALRP27797 417 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 TRAPPC10P48553 1259 aa8.78□□□□□ -1
PROM1-206ENST00000505450 CHRNDQ07001 517 aa8.78□□□□□ -1
PROM1-206ENST00000505450 ELOA2Q8IYF1 753 aaPredicted RBP8.78□□□□□ -1
PROM1-206ENST00000505450 ZNF473Q8WTR7 871 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 RSRC1Q96IZ7 334 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 PAIP2Q9BPZ3 127 aaKnown RBP8.78□□□□□ -1
PROM1-206ENST00000505450 GOLPH3Q9H4A6 298 aa8.78□□□□□ -1
PROM1-206ENST00000505450 SLC24A3Q9HC58 644 aa8.78□□□□□ -1
PROM1-206ENST00000505450 KLC4Q9NSK0 619 aa8.78□□□□□ -1
PROM1-206ENST00000505450 C3P01024 1663 aa8.77□□□□□ -1
PROM1-206ENST00000505450 SRGNP10124 158 aa8.77□□□□□ -1
PROM1-206ENST00000505450 TMOD1P28289 359 aa8.77□□□□□ -1
PROM1-206ENST00000505450 LLGL1Q15334 1064 aa8.77□□□□□ -1
PROM1-206ENST00000505450 C9orf131Q5VYM1 1079 aa8.77□□□□□ -1
PROM1-206ENST00000505450 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.77□□□□□ -1
PROM1-206ENST00000505450 DDX42Q86XP3 938 aaKnown RBP eCLIP8.77□□□□□ -1
PROM1-206ENST00000505450 SPATS2Q86XZ4 545 aaKnown RBP8.77□□□□□ -1
PROM1-206ENST00000505450 COL23A1Q86Y22 540 aaPredicted RBP8.77□□□□□ -1
PROM1-206ENST00000505450 FAM133AQ8N9E0 248 aa8.77□□□□□ -1
PROM1-206ENST00000505450 CCDC26Q8TAB7 109 aa8.77□□□□□ -1
PROM1-206ENST00000505450 TMEM60Q9H2L4 133 aa8.77□□□□□ -1
PROM1-206ENST00000505450 KCNK9Q9NPC2 374 aa8.77□□□□□ -1
PROM1-206ENST00000505450 TSKSQ9UJT2 592 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms