RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 CCDC144BQ3MJ40 725 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 CCSAPQ6IQ19 270 aaPredicted RBP9.33□□□□□ -0.92
RFC1-207ENST00000504554 TAPT1Q6NXT6 567 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 EEPD1Q7L9B9 569 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 RAB11FIP4Q86YS3 637 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 FBXO16Q8IX29 292 aaPredicted RBP9.33□□□□□ -0.92
RFC1-207ENST00000504554 KLHDC9Q8NEP7 349 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 MORC4Q8TE76 937 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 FERMT2Q96AC1 680 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 TCEANC2Q96MN5 208 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 PRO3102Q9H379 93 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 V9GY48 417 aaPredicted RBP9.33□□□□□ -0.92
RFC1-207ENST00000504554 SZT2Q5T011 3432 aa9.33□□□□□ -0.92
RFC1-207ENST00000504554 DNAH12Q6ZR08 3092 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 NEFLP07196 543 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 RARBP10826 455 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 CPA1P15085 419 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 ALDH5A1P51649 535 aaPredicted RBP9.32□□□□□ -0.92
RFC1-207ENST00000504554 EXOSC10Q01780 885 aaKnown RBP9.32□□□□□ -0.92
RFC1-207ENST00000504554 RNF207Q6ZRF8 634 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 SYTL5Q8TDW5 730 aaPredicted RBP9.32□□□□□ -0.92
RFC1-207ENST00000504554 KCNB2Q92953 911 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 PIGSQ96S52 555 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 ABHD16BQ9H3Z7 469 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 RIOX1Q9H6W3 641 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 PPP4R2Q9NY27 417 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 FAM184BQ9ULE4 1060 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 GNEQ9Y223 722 aaKnown RBP9.32□□□□□ -0.92
RFC1-207ENST00000504554 PLXNA1Q9UIW2 1896 aa9.32□□□□□ -0.92
RFC1-207ENST00000504554 ASB14A6NK59 587 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 DUSP11O75319 330 aaKnown RBP9.31□□□□□ -0.92
RFC1-207ENST00000504554 PLEKHA8P1O95397 391 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 SMPD1P17405 629 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 EDNRBP24530 442 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 MCM5P33992 734 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 RTP1P59025 263 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 HABP4Q5JVS0 413 aaKnown RBP9.31□□□□□ -0.92
RFC1-207ENST00000504554 SLC39A5Q6ZMH5 540 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 FBXO11Q86XK2 927 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 ZNF654Q8IZM8 581 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 CMTR1Q8N1G2 835 aaKnown RBP9.31□□□□□ -0.92
RFC1-207ENST00000504554 ARRDC4Q8NCT1 418 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 RGS22Q8NE09 1264 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 NUP133Q8WUM0 1156 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 PIBF1Q8WXW3 757 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
RFC1-207ENST00000504554 TAAR1Q96RJ0 339 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 UPF3AQ9H1J1 476 aaKnown RBP9.31□□□□□ -0.92
RFC1-207ENST00000504554 PHF24Q9UPV7 400 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 LRRC37A2A6NM11 1700 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 ABCB11O95342 1321 aa9.31□□□□□ -0.92
RFC1-207ENST00000504554 A0A1W2PQ45 241 aaPredicted RBP9.3□□□□□ -0.92
RFC1-207ENST00000504554 A0A1W2PQY0 241 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 ERICH2A1L162 156 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 KBTBD13C9JR72 458 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 ZBTB5O15062 677 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 DHX16O60231 1041 aaKnown RBP9.3□□□□□ -0.92
RFC1-207ENST00000504554 GJA9P57773 515 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 BEX3Q00994 111 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 TNFAIP2Q03169 654 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 SNX17Q15036 470 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 KCNA10Q16322 511 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 TRIM60Q495X7 471 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 SH3RF1Q7Z6J0 888 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 CATIPQ7Z7H3 387 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 HOMER1Q86YM7 354 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 SRBD1Q8N5C6 995 aaKnown RBP9.3□□□□□ -0.92
RFC1-207ENST00000504554 NEK1Q96PY6 1258 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 GDF15Q99988 308 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 BRPF3Q9ULD4 1205 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 SNX14Q9Y5W7 946 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 NR2E3Q9Y5X4 410 aa9.3□□□□□ -0.92
RFC1-207ENST00000504554 hCG_1642624A0A1W2PR95 340 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 RBM47A0AV96 593 aaKnown RBP9.29□□□□□ -0.92
RFC1-207ENST00000504554 DDAH1O94760 285 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 ARIH2O95376 493 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 ASGR1P07306 291 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 C6orf222P0C671 652 aaPredicted RBP9.29□□□□□ -0.92
RFC1-207ENST00000504554 DNAJB2P25686 324 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 CST5P28325 142 aaPredicted RBP9.29□□□□□ -0.92
RFC1-207ENST00000504554 HSPA4P34932 840 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 LIFRP42702 1097 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 ACLYP53396 1101 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 NKX3-2P78367 333 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 GHRHRQ02643 423 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 SART3Q15020 963 aaKnown RBP9.29□□□□□ -0.92
RFC1-207ENST00000504554 RNF180Q86T96 592 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 SGMS1Q86VZ5 419 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 COPS5Q92905 334 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 TMEM87BQ96K49 555 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 MAP3K14Q99558 947 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 MTA3Q9BTC8 594 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 AMNQ9BXJ7 453 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 VTA1Q9NP79 307 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 ATP11BQ9Y2G3 1177 aa9.29□□□□□ -0.92
RFC1-207ENST00000504554 MRPL11Q9Y3B7 192 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms